RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 KRTAP5-4Q6L8H1 288 aa7.52□□□□□ -1.21
APTR-202ENST00000416650 KRTAP4-6Q9BYQ5 205 aa7.4□□□□□ -1.22
APTR-202ENST00000416650 KRTAP5-10Q6L8G5 202 aa7.35□□□□□ -1.23
APTR-202ENST00000416650 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
APTR-202ENST00000416650 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
APTR-202ENST00000416650 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
APTR-202ENST00000416650 ANAPC13Q9BS18 74 aa7.23□□□□□ -1.25
APTR-202ENST00000416650 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
APTR-202ENST00000416650 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
APTR-202ENST00000416650 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
APTR-202ENST00000416650 KRTAP5-3Q6L8H2 238 aa7.12□□□□□ -1.27
APTR-202ENST00000416650 KRTAP5-5Q701N2 237 aaPredicted RBP7.12□□□□□ -1.27
APTR-202ENST00000416650 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
APTR-202ENST00000416650 KRTAP5-7Q6L8G8 165 aa7.1□□□□□ -1.27
APTR-202ENST00000416650 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
APTR-202ENST00000416650 UQCR11O14957 56 aa7.02□□□□□ -1.29
APTR-202ENST00000416650 KRTAP12-4P60329 112 aa6.97□□□□□ -1.29
APTR-202ENST00000416650 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
APTR-202ENST00000416650 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
APTR-202ENST00000416650 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
APTR-202ENST00000416650 TMEM258P61165 79 aa6.83□□□□□ -1.32
APTR-202ENST00000416650 MIR22HGQ0VDD5 57 aa6.83□□□□□ -1.32
APTR-202ENST00000416650 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
APTR-202ENST00000416650 K7ERS5 55 aa6.75□□□□□ -1.33
APTR-202ENST00000416650 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.34
APTR-202ENST00000416650 KRTAP23-1A1A580 65 aa6.68□□□□□ -1.34
APTR-202ENST00000416650 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
APTR-202ENST00000416650 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
APTR-202ENST00000416650 PSPHP1O15172 72 aa6.55□□□□□ -1.36
APTR-202ENST00000416650 MT1AP04731 61 aa6.55□□□□□ -1.36
APTR-202ENST00000416650 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
APTR-202ENST00000416650 KRTAP6-1Q3LI64 71 aa6.52□□□□□ -1.37
APTR-202ENST00000416650 V9GYY9 64 aa6.51□□□□□ -1.37
APTR-202ENST00000416650 Q1T7F1 81 aa6.45□□□□□ -1.38
APTR-202ENST00000416650 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
APTR-202ENST00000416650 KRTAP5-8O75690 187 aa6.34□□□□□ -1.39
APTR-202ENST00000416650 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
APTR-202ENST00000416650 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
APTR-202ENST00000416650 A6NED7 52 aa6.31□□□□□ -1.4
APTR-202ENST00000416650 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
APTR-202ENST00000416650 KRTAP6-2Q3LI66 62 aa6.27□□□□□ -1.41
APTR-202ENST00000416650 AHNAKQ09666 5890 aaKnown RBP6.25□□□□□ -1.41
APTR-202ENST00000416650 OBSCNQ5VST9 7968 aa6.25□□□□□ -1.41
APTR-202ENST00000416650 ROMO1P60602 79 aa6.24□□□□□ -1.41
APTR-202ENST00000416650 MUC5BQ9HC84 5762 aaPredicted RBP6.24□□□□□ -1.41
APTR-202ENST00000416650 MUC5ACP98088 5654 aa6.24□□□□□ -1.41
APTR-202ENST00000416650 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
APTR-202ENST00000416650 MT3P25713 68 aa5.99□□□□□ -1.45
APTR-202ENST00000416650 KRTAP5-1Q6L8H4 278 aa5.91□□□□□ -1.46
APTR-202ENST00000416650 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
APTR-202ENST00000416650 PCP4P48539 62 aa5.39□□□□□ -1.55
APTR-202ENST00000416650 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
APTR-202ENST00000416650 LCE1BQ5T7P3 118 aa5.25□□□□□ -1.57
APTR-202ENST00000416650 LCE1CQ5T751 118 aa5.17□□□□□ -1.58
APTR-202ENST00000416650 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
APTR-202ENST00000416650 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
APTR-202ENST00000416650 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
APTR-202ENST00000416650 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
APTR-202ENST00000416650 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
APTR-202ENST00000416650 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
APTR-202ENST00000416650 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
APTR-202ENST00000416650 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
APTR-202ENST00000416650 H3BS24 57 aa4.44□□□□□ -1.7
APTR-202ENST00000416650 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
APTR-202ENST00000416650 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
APTR-202ENST00000416650 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
APTR-202ENST00000416650 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
APTR-202ENST00000416650 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
APTR-202ENST00000416650 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
APTR-202ENST00000416650 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
APTR-202ENST00000416650 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
APTR-202ENST00000416650 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
APTR-202ENST00000416650 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
APTR-202ENST00000416650 PRM1P04553 51 aa3.18□□□□□ -1.9
APTR-202ENST00000416650 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
APTR-202ENST00000416650 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
APTR-202ENST00000416650 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
APTR-202ENST00000416650 INE1O15225 51 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 39.7 ms