RNA–Protein interactions for RNA: ENST00000416591.5

CAPN10-209, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,514 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-209ENST00000416591 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
CAPN10-209ENST00000416591 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
CAPN10-209ENST00000416591 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
CAPN10-209ENST00000416591 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
CAPN10-209ENST00000416591 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
CAPN10-209ENST00000416591 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
CAPN10-209ENST00000416591 MT1GP13640 62 aa6.55□□□□□ -1.36
CAPN10-209ENST00000416591 KRTAP19-3Q7Z4W3 81 aa6.54□□□□□ -1.36
CAPN10-209ENST00000416591 MT1MQ8N339 61 aa6.53□□□□□ -1.36
CAPN10-209ENST00000416591 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
CAPN10-209ENST00000416591 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
CAPN10-209ENST00000416591 KRTAP12-4P60329 112 aa6.35□□□□□ -1.39
CAPN10-209ENST00000416591 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
CAPN10-209ENST00000416591 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
CAPN10-209ENST00000416591 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
CAPN10-209ENST00000416591 DSTQ03001 7570 aaKnown RBP6.12□□□□□ -1.43
CAPN10-209ENST00000416591 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
CAPN10-209ENST00000416591 MACF1Q9UPN3 7388 aaKnown RBP6.11□□□□□ -1.43
CAPN10-209ENST00000416591 MT1AP04731 61 aa6.02□□□□□ -1.45
CAPN10-209ENST00000416591 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
CAPN10-209ENST00000416591 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
CAPN10-209ENST00000416591 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
CAPN10-209ENST00000416591 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
CAPN10-209ENST00000416591 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
CAPN10-209ENST00000416591 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
CAPN10-209ENST00000416591 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
CAPN10-209ENST00000416591 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
CAPN10-209ENST00000416591 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
CAPN10-209ENST00000416591 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
CAPN10-209ENST00000416591 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
CAPN10-209ENST00000416591 SPRR2EP22531 72 aa5.76□□□□□ -1.49
CAPN10-209ENST00000416591 SPRR2BP35325 72 aa5.76□□□□□ -1.49
CAPN10-209ENST00000416591 SPRR2AP35326 72 aa5.76□□□□□ -1.49
CAPN10-209ENST00000416591 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
CAPN10-209ENST00000416591 PRM1P04553 51 aa5.65□□□□□ -1.5
CAPN10-209ENST00000416591 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
CAPN10-209ENST00000416591 SPRR2DP22532 72 aa5.51□□□□□ -1.53
CAPN10-209ENST00000416591 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
CAPN10-209ENST00000416591 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
CAPN10-209ENST00000416591 NEBP20929 6669 aa5.35□□□□□ -1.55
CAPN10-209ENST00000416591 MT3P25713 68 aa5.27□□□□□ -1.57
CAPN10-209ENST00000416591 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
CAPN10-209ENST00000416591 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
CAPN10-209ENST00000416591 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
CAPN10-209ENST00000416591 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
CAPN10-209ENST00000416591 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
CAPN10-209ENST00000416591 MT4P47944 62 aa4.86□□□□□ -1.63
CAPN10-209ENST00000416591 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
CAPN10-209ENST00000416591 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
CAPN10-209ENST00000416591 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
CAPN10-209ENST00000416591 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
CAPN10-209ENST00000416591 LCE1DQ5T752 114 aa4.57□□□□□ -1.68
CAPN10-209ENST00000416591 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
CAPN10-209ENST00000416591 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
CAPN10-209ENST00000416591 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
CAPN10-209ENST00000416591 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
CAPN10-209ENST00000416591 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
CAPN10-209ENST00000416591 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
CAPN10-209ENST00000416591 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CAPN10-209ENST00000416591 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
CAPN10-209ENST00000416591 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
CAPN10-209ENST00000416591 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
CAPN10-209ENST00000416591 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
CAPN10-209ENST00000416591 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
CAPN10-209ENST00000416591 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
CAPN10-209ENST00000416591 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
CAPN10-209ENST00000416591 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
CAPN10-209ENST00000416591 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.84
CAPN10-209ENST00000416591 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
CAPN10-209ENST00000416591 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
CAPN10-209ENST00000416591 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
CAPN10-209ENST00000416591 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
CAPN10-209ENST00000416591 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
CAPN10-209ENST00000416591 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
CAPN10-209ENST00000416591 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
CAPN10-209ENST00000416591 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CAPN10-209ENST00000416591 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
CAPN10-209ENST00000416591 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 5.2 ms