RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
SIK3-203ENST00000415541 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
SIK3-203ENST00000415541 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
SIK3-203ENST00000415541 KRTAP4-7Q9BYR0 210 aa2.65□□□□□ -1.99
SIK3-203ENST00000415541 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
SIK3-203ENST00000415541 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
SIK3-203ENST00000415541 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
SIK3-203ENST00000415541 MT1EP04732 61 aa2.59□□□□□ -1.99
SIK3-203ENST00000415541 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
SIK3-203ENST00000415541 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
SIK3-203ENST00000415541 MT1LQ93083 61 aa2.57□□□□□ -2
SIK3-203ENST00000415541 MT1GP13640 62 aa2.55□□□□□ -2
SIK3-203ENST00000415541 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
SIK3-203ENST00000415541 SPRR2EP22531 72 aa2.54□□□□□ -2
SIK3-203ENST00000415541 SPRR2BP35325 72 aa2.54□□□□□ -2
SIK3-203ENST00000415541 SPRR2AP35326 72 aa2.54□□□□□ -2
SIK3-203ENST00000415541 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
SIK3-203ENST00000415541 KRTAP19-3Q7Z4W3 81 aa2.52□□□□□ -2.01
SIK3-203ENST00000415541 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
SIK3-203ENST00000415541 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
SIK3-203ENST00000415541 LOC100996750A0A140TA64 210 aa2.46□□□□□ -2.02
SIK3-203ENST00000415541 MT1MQ8N339 61 aa2.46□□□□□ -2.02
SIK3-203ENST00000415541 SPRR2DP22532 72 aa2.44□□□□□ -2.02
SIK3-203ENST00000415541 KRTAP9-7A8MTY7 169 aa2.42□□□□□ -2.02
SIK3-203ENST00000415541 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.39□□□□□ -2.03
SIK3-203ENST00000415541 LCE3BQ5TA77 95 aa2.39□□□□□ -2.03
SIK3-203ENST00000415541 PRM1P04553 51 aa2.37□□□□□ -2.03
SIK3-203ENST00000415541 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
SIK3-203ENST00000415541 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.04
SIK3-203ENST00000415541 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.04
SIK3-203ENST00000415541 LCE5AQ5TCM9 118 aa2.34□□□□□ -2.04
SIK3-203ENST00000415541 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
SIK3-203ENST00000415541 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
SIK3-203ENST00000415541 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
SIK3-203ENST00000415541 MT1AP04731 61 aa2.31□□□□□ -2.04
SIK3-203ENST00000415541 KRTAP5-9P26371 169 aa2.22□□□□□ -2.05
SIK3-203ENST00000415541 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
SIK3-203ENST00000415541 MT4P47944 62 aa2.22□□□□□ -2.05
SIK3-203ENST00000415541 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
SIK3-203ENST00000415541 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
SIK3-203ENST00000415541 NEBP20929 6669 aa2.17□□□□□ -2.06
SIK3-203ENST00000415541 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
SIK3-203ENST00000415541 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
SIK3-203ENST00000415541 MT3P25713 68 aa2.1□□□□□ -2.07
SIK3-203ENST00000415541 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
SIK3-203ENST00000415541 LCE1DQ5T752 114 aa2.05□□□□□ -2.08
SIK3-203ENST00000415541 KRTAP9-4Q9BYQ2 154 aa2.05□□□□□ -2.08
SIK3-203ENST00000415541 KRTAP4-6Q9BYQ5 205 aa1.99□□□□□ -2.09
SIK3-203ENST00000415541 LCE4AQ5TA78 99 aa1.97□□□□□ -2.09
SIK3-203ENST00000415541 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SIK3-203ENST00000415541 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
SIK3-203ENST00000415541 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
SIK3-203ENST00000415541 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
SIK3-203ENST00000415541 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
SIK3-203ENST00000415541 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
SIK3-203ENST00000415541 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
SIK3-203ENST00000415541 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
SIK3-203ENST00000415541 KRTAP4-11Q9BYQ6 195 aa1.73□□□□□ -2.13
SIK3-203ENST00000415541 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
SIK3-203ENST00000415541 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
SIK3-203ENST00000415541 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
SIK3-203ENST00000415541 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
SIK3-203ENST00000415541 KRTAP5-3Q6L8H2 238 aa1.64□□□□□ -2.15
SIK3-203ENST00000415541 KRTAP4-12Q9BQ66 201 aa1.61□□□□□ -2.15
SIK3-203ENST00000415541 KRTAP9-9Q9BYP9 154 aa1.6□□□□□ -2.15
SIK3-203ENST00000415541 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
SIK3-203ENST00000415541 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
SIK3-203ENST00000415541 LCE1CQ5T751 118 aa1.52□□□□□ -2.17
SIK3-203ENST00000415541 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
SIK3-203ENST00000415541 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SIK3-203ENST00000415541 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
SIK3-203ENST00000415541 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
SIK3-203ENST00000415541 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
SIK3-203ENST00000415541 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SIK3-203ENST00000415541 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
SIK3-203ENST00000415541 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
SIK3-203ENST00000415541 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
SIK3-203ENST00000415541 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 164.8 ms