RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 MT1LQ93083 61 aa4.06□□□□□ -1.76
RBM28-202ENST00000415472 INE1O15225 51 aa4.02□□□□□ -1.77
RBM28-202ENST00000415472 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
RBM28-202ENST00000415472 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
RBM28-202ENST00000415472 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
RBM28-202ENST00000415472 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
RBM28-202ENST00000415472 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
RBM28-202ENST00000415472 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
RBM28-202ENST00000415472 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
RBM28-202ENST00000415472 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
RBM28-202ENST00000415472 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
RBM28-202ENST00000415472 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
RBM28-202ENST00000415472 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
RBM28-202ENST00000415472 MT1GP13640 62 aa3.82□□□□□ -1.8
RBM28-202ENST00000415472 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
RBM28-202ENST00000415472 MT1MQ8N339 61 aa3.81□□□□□ -1.8
RBM28-202ENST00000415472 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
RBM28-202ENST00000415472 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
RBM28-202ENST00000415472 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
RBM28-202ENST00000415472 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
RBM28-202ENST00000415472 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
RBM28-202ENST00000415472 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
RBM28-202ENST00000415472 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
RBM28-202ENST00000415472 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.82
RBM28-202ENST00000415472 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
RBM28-202ENST00000415472 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
RBM28-202ENST00000415472 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
RBM28-202ENST00000415472 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
RBM28-202ENST00000415472 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
RBM28-202ENST00000415472 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
RBM28-202ENST00000415472 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
RBM28-202ENST00000415472 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
RBM28-202ENST00000415472 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.85
RBM28-202ENST00000415472 NEBP20929 6669 aa3.43□□□□□ -1.86
RBM28-202ENST00000415472 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
RBM28-202ENST00000415472 MT1AP04731 61 aa3.38□□□□□ -1.87
RBM28-202ENST00000415472 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
RBM28-202ENST00000415472 SPRR2EP22531 72 aa3.36□□□□□ -1.87
RBM28-202ENST00000415472 SPRR2BP35325 72 aa3.36□□□□□ -1.87
RBM28-202ENST00000415472 SPRR2AP35326 72 aa3.36□□□□□ -1.87
RBM28-202ENST00000415472 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
RBM28-202ENST00000415472 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
RBM28-202ENST00000415472 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
RBM28-202ENST00000415472 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
RBM28-202ENST00000415472 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
RBM28-202ENST00000415472 SPRR2DP22532 72 aa3.21□□□□□ -1.9
RBM28-202ENST00000415472 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
RBM28-202ENST00000415472 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.9
RBM28-202ENST00000415472 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
RBM28-202ENST00000415472 PRM1P04553 51 aa3.08□□□□□ -1.92
RBM28-202ENST00000415472 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
RBM28-202ENST00000415472 MT3P25713 68 aa3.02□□□□□ -1.93
RBM28-202ENST00000415472 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
RBM28-202ENST00000415472 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
RBM28-202ENST00000415472 MT4P47944 62 aa2.87□□□□□ -1.95
RBM28-202ENST00000415472 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
RBM28-202ENST00000415472 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
RBM28-202ENST00000415472 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
RBM28-202ENST00000415472 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
RBM28-202ENST00000415472 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
RBM28-202ENST00000415472 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
RBM28-202ENST00000415472 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
RBM28-202ENST00000415472 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
RBM28-202ENST00000415472 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
RBM28-202ENST00000415472 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
RBM28-202ENST00000415472 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
RBM28-202ENST00000415472 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
RBM28-202ENST00000415472 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
RBM28-202ENST00000415472 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
RBM28-202ENST00000415472 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
RBM28-202ENST00000415472 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
RBM28-202ENST00000415472 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
RBM28-202ENST00000415472 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
RBM28-202ENST00000415472 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
RBM28-202ENST00000415472 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
RBM28-202ENST00000415472 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
RBM28-202ENST00000415472 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms