RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
TRIM27-203ENST00000414543 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
TRIM27-203ENST00000414543 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
TRIM27-203ENST00000414543 MT1LQ93083 61 aa3.65□□□□□ -1.82
TRIM27-203ENST00000414543 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
TRIM27-203ENST00000414543 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
TRIM27-203ENST00000414543 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
TRIM27-203ENST00000414543 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
TRIM27-203ENST00000414543 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
TRIM27-203ENST00000414543 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
TRIM27-203ENST00000414543 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
TRIM27-203ENST00000414543 MT1GP13640 62 aa3.56□□□□□ -1.84
TRIM27-203ENST00000414543 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
TRIM27-203ENST00000414543 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
TRIM27-203ENST00000414543 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
TRIM27-203ENST00000414543 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
TRIM27-203ENST00000414543 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
TRIM27-203ENST00000414543 MT1MQ8N339 61 aa3.51□□□□□ -1.85
TRIM27-203ENST00000414543 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
TRIM27-203ENST00000414543 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
TRIM27-203ENST00000414543 SPRR2EP22531 72 aa3.47□□□□□ -1.85
TRIM27-203ENST00000414543 SPRR2BP35325 72 aa3.47□□□□□ -1.85
TRIM27-203ENST00000414543 SPRR2AP35326 72 aa3.47□□□□□ -1.85
TRIM27-203ENST00000414543 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
TRIM27-203ENST00000414543 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
TRIM27-203ENST00000414543 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
TRIM27-203ENST00000414543 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
TRIM27-203ENST00000414543 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.86
TRIM27-203ENST00000414543 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
TRIM27-203ENST00000414543 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
TRIM27-203ENST00000414543 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
TRIM27-203ENST00000414543 SPRR2DP22532 72 aa3.34□□□□□ -1.87
TRIM27-203ENST00000414543 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
TRIM27-203ENST00000414543 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.91
TRIM27-203ENST00000414543 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.91
TRIM27-203ENST00000414543 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
TRIM27-203ENST00000414543 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
TRIM27-203ENST00000414543 NEBP20929 6669 aa3.12□□□□□ -1.91
TRIM27-203ENST00000414543 MT1AP04731 61 aa3.11□□□□□ -1.91
TRIM27-203ENST00000414543 INE1O15225 51 aa3.08□□□□□ -1.92
TRIM27-203ENST00000414543 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
TRIM27-203ENST00000414543 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
TRIM27-203ENST00000414543 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
TRIM27-203ENST00000414543 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
TRIM27-203ENST00000414543 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
TRIM27-203ENST00000414543 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
TRIM27-203ENST00000414543 MT4P47944 62 aa2.91□□□□□ -1.94
TRIM27-203ENST00000414543 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
TRIM27-203ENST00000414543 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.96
TRIM27-203ENST00000414543 MT3P25713 68 aa2.83□□□□□ -1.96
TRIM27-203ENST00000414543 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
TRIM27-203ENST00000414543 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
TRIM27-203ENST00000414543 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
TRIM27-203ENST00000414543 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
TRIM27-203ENST00000414543 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.98
TRIM27-203ENST00000414543 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
TRIM27-203ENST00000414543 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
TRIM27-203ENST00000414543 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
TRIM27-203ENST00000414543 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
TRIM27-203ENST00000414543 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
TRIM27-203ENST00000414543 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
TRIM27-203ENST00000414543 PRM1P04553 51 aa2.31□□□□□ -2.04
TRIM27-203ENST00000414543 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
TRIM27-203ENST00000414543 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
TRIM27-203ENST00000414543 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
TRIM27-203ENST00000414543 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
TRIM27-203ENST00000414543 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
TRIM27-203ENST00000414543 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
TRIM27-203ENST00000414543 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
TRIM27-203ENST00000414543 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
TRIM27-203ENST00000414543 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
TRIM27-203ENST00000414543 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
TRIM27-203ENST00000414543 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
TRIM27-203ENST00000414543 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
TRIM27-203ENST00000414543 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
TRIM27-203ENST00000414543 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
TRIM27-203ENST00000414543 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
TRIM27-203ENST00000414543 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 74.8 ms