RNA–Protein interactions for RNA: ENST00000414253.5

FAAP20-206, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-206ENST00000414253 MT1LQ93083 61 aa8.48□□□□□ -1.05
FAAP20-206ENST00000414253 KRTAP19-4Q3LI73 84 aa8.47□□□□□ -1.05
FAAP20-206ENST00000414253 KRTAP4-7Q9BYR0 210 aa8.46□□□□□ -1.05
FAAP20-206ENST00000414253 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
FAAP20-206ENST00000414253 MACF1Q9UPN3 7388 aaKnown RBP8.29□□□□□ -1.08
FAAP20-206ENST00000414253 MUC12Q9UKN1 5478 aa8.27□□□□□ -1.09
FAAP20-206ENST00000414253 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
FAAP20-206ENST00000414253 SYNE2Q8WXH0 6885 aaKnown RBP8.08□□□□□ -1.12
FAAP20-206ENST00000414253 KRTAP19-3Q7Z4W3 81 aa8.05□□□□□ -1.12
FAAP20-206ENST00000414253 KRTAP4-3Q9BYR4 195 aa8.01□□□□□ -1.13
FAAP20-206ENST00000414253 MT1GP13640 62 aa8.01□□□□□ -1.13
FAAP20-206ENST00000414253 SPRR2FQ96RM1 72 aa8□□□□□ -1.13
FAAP20-206ENST00000414253 MT1MQ8N339 61 aa7.99□□□□□ -1.13
FAAP20-206ENST00000414253 LOC100996750A0A140TA64 210 aa7.89□□□□□ -1.15
FAAP20-206ENST00000414253 MDN1Q9NU22 5596 aa7.84□□□□□ -1.15
FAAP20-206ENST00000414253 LCE5AQ5TCM9 118 aa7.82□□□□□ -1.16
FAAP20-206ENST00000414253 DSTQ03001 7570 aaKnown RBP7.8□□□□□ -1.16
FAAP20-206ENST00000414253 KRTAP5-9P26371 169 aa7.7□□□□□ -1.18
FAAP20-206ENST00000414253 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
FAAP20-206ENST00000414253 KRTAP12-4P60329 112 aa7.55□□□□□ -1.2
FAAP20-206ENST00000414253 KRTAP9-6A0A140TA67 174 aa7.5□□□□□ -1.21
FAAP20-206ENST00000414253 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
FAAP20-206ENST00000414253 SPRR2EP22531 72 aa7.45□□□□□ -1.22
FAAP20-206ENST00000414253 SPRR2BP35325 72 aa7.45□□□□□ -1.22
FAAP20-206ENST00000414253 SPRR2AP35326 72 aa7.45□□□□□ -1.22
FAAP20-206ENST00000414253 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
FAAP20-206ENST00000414253 LCE3BQ5TA77 95 aa7.28□□□□□ -1.24
FAAP20-206ENST00000414253 MT1AP04731 61 aa7.18□□□□□ -1.26
FAAP20-206ENST00000414253 KRTAP6-1Q3LI64 71 aa7.17□□□□□ -1.26
FAAP20-206ENST00000414253 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
FAAP20-206ENST00000414253 SPRR2DP22532 72 aa7.15□□□□□ -1.26
FAAP20-206ENST00000414253 KRTAP5-5Q701N2 237 aaPredicted RBP7.12□□□□□ -1.27
FAAP20-206ENST00000414253 SYNE1Q8NF91 8797 aaKnown RBP7.02□□□□□ -1.29
FAAP20-206ENST00000414253 NEBP20929 6669 aa6.98□□□□□ -1.29
FAAP20-206ENST00000414253 LCE3DQ9BYE3 92 aa6.97□□□□□ -1.29
FAAP20-206ENST00000414253 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
FAAP20-206ENST00000414253 LCE3EQ5T5B0 92 aa6.91□□□□□ -1.3
FAAP20-206ENST00000414253 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
FAAP20-206ENST00000414253 PRM1P04553 51 aa6.72□□□□□ -1.33
FAAP20-206ENST00000414253 KRTAP5-4Q6L8H1 288 aa6.52□□□□□ -1.37
FAAP20-206ENST00000414253 KRTAP6-2Q3LI66 62 aa6.49□□□□□ -1.37
FAAP20-206ENST00000414253 MT3P25713 68 aa6.43□□□□□ -1.38
FAAP20-206ENST00000414253 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
FAAP20-206ENST00000414253 OBSCNQ5VST9 7968 aa6.3□□□□□ -1.4
FAAP20-206ENST00000414253 MT4P47944 62 aa6.3□□□□□ -1.4
FAAP20-206ENST00000414253 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
FAAP20-206ENST00000414253 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
FAAP20-206ENST00000414253 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
FAAP20-206ENST00000414253 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
FAAP20-206ENST00000414253 KRTAP20-2Q3LI61 65 aa6.13□□□□□ -1.43
FAAP20-206ENST00000414253 LCE1DQ5T752 114 aa6.09□□□□□ -1.44
FAAP20-206ENST00000414253 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
FAAP20-206ENST00000414253 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
FAAP20-206ENST00000414253 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
FAAP20-206ENST00000414253 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
FAAP20-206ENST00000414253 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
FAAP20-206ENST00000414253 AHNAK2Q8IVF2 5795 aa5.21□□□□□ -1.58
FAAP20-206ENST00000414253 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
FAAP20-206ENST00000414253 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
FAAP20-206ENST00000414253 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
FAAP20-206ENST00000414253 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
FAAP20-206ENST00000414253 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
FAAP20-206ENST00000414253 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
FAAP20-206ENST00000414253 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
FAAP20-206ENST00000414253 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
FAAP20-206ENST00000414253 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.64
FAAP20-206ENST00000414253 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
FAAP20-206ENST00000414253 KRTAP21-2Q3LI59 83 aa4.66□□□□□ -1.66
FAAP20-206ENST00000414253 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
FAAP20-206ENST00000414253 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
FAAP20-206ENST00000414253 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
FAAP20-206ENST00000414253 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
FAAP20-206ENST00000414253 KRTAP21-1Q3LI58 79 aa4.27□□□□□ -1.73
FAAP20-206ENST00000414253 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
FAAP20-206ENST00000414253 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.78
FAAP20-206ENST00000414253 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
FAAP20-206ENST00000414253 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
FAAP20-206ENST00000414253 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 115 ms