RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KRTAP4-3Q9BYR4 195 aa9.21□□□□□ -0.94
VEGFA-207ENST00000413642 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
VEGFA-207ENST00000413642 KRTAP12-3P60328 96 aa9.06□□□□□ -0.96
VEGFA-207ENST00000413642 LCE1DQ5T752 114 aa9.05□□□□□ -0.96
VEGFA-207ENST00000413642 GPR98Q8WXG9 6306 aa9.02□□□□□ -0.97
VEGFA-207ENST00000413642 SVIPQ8NHG7 77 aa9.01□□□□□ -0.97
VEGFA-207ENST00000413642 KRTAP4-7Q9BYR0 210 aa9.01□□□□□ -0.97
VEGFA-207ENST00000413642 LCE4AQ5TA78 99 aa8.99□□□□□ -0.97
VEGFA-207ENST00000413642 MT4P47944 62 aa8.97□□□□□ -0.97
VEGFA-207ENST00000413642 PSPHP1O15172 72 aa8.96□□□□□ -0.98
VEGFA-207ENST00000413642 KRTAP25-1Q3LHN0 102 aa8.89□□□□□ -0.99
VEGFA-207ENST00000413642 Q1T7F1 81 aa8.86□□□□□ -0.99
VEGFA-207ENST00000413642 KRTAP5-4Q6L8H1 288 aa8.86□□□□□ -0.99
VEGFA-207ENST00000413642 V9GYY9 64 aa8.86□□□□□ -0.99
VEGFA-207ENST00000413642 HMCN1Q96RW7 5635 aa8.84□□□□□ -1
VEGFA-207ENST00000413642 K7ERS5 55 aa8.83□□□□□ -1
VEGFA-207ENST00000413642 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
VEGFA-207ENST00000413642 A6NED7 52 aa8.6□□□□□ -1.03
VEGFA-207ENST00000413642 KRTAP5-5Q701N2 237 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-207ENST00000413642 AHNAK2Q8IVF2 5795 aa8.54□□□□□ -1.04
VEGFA-207ENST00000413642 LOC100996750A0A140TA64 210 aa8.52□□□□□ -1.05
VEGFA-207ENST00000413642 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
VEGFA-207ENST00000413642 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.06
VEGFA-207ENST00000413642 CDC42SE1Q9NRR8 79 aa8.41□□□□□ -1.06
VEGFA-207ENST00000413642 KRTAP19-4Q3LI73 84 aa8.4□□□□□ -1.06
VEGFA-207ENST00000413642 KRTAP20-2Q3LI61 65 aa8.38□□□□□ -1.07
VEGFA-207ENST00000413642 KRTAP5-10Q6L8G5 202 aa8.37□□□□□ -1.07
VEGFA-207ENST00000413642 RPS28P62857 69 aaKnown RBP8.35□□□□□ -1.07
VEGFA-207ENST00000413642 LCE3CQ5T5A8 94 aa8.35□□□□□ -1.07
VEGFA-207ENST00000413642 ROMO1P60602 79 aa8.3□□□□□ -1.08
VEGFA-207ENST00000413642 SPRR5A0A1B0GTR4 108 aa8.29□□□□□ -1.08
VEGFA-207ENST00000413642 KRTAP12-4P60329 112 aa8.27□□□□□ -1.09
VEGFA-207ENST00000413642 SYNE1Q8NF91 8797 aaKnown RBP8.24□□□□□ -1.09
VEGFA-207ENST00000413642 KRTAP5-3Q6L8H2 238 aa8.21□□□□□ -1.1
VEGFA-207ENST00000413642 KRTAP5-7Q6L8G8 165 aa8.03□□□□□ -1.12
VEGFA-207ENST00000413642 MT1AP04731 61 aa7.96□□□□□ -1.14
VEGFA-207ENST00000413642 KRTAP6-1Q3LI64 71 aa7.96□□□□□ -1.14
VEGFA-207ENST00000413642 KRTAP9-6A8MVA2 160 aa7.95□□□□□ -1.14
VEGFA-207ENST00000413642 KRTAP5-2Q701N4 177 aa7.77□□□□□ -1.17
VEGFA-207ENST00000413642 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
VEGFA-207ENST00000413642 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
VEGFA-207ENST00000413642 KRTAP4-11Q9BYQ6 195 aa7.63□□□□□ -1.19
VEGFA-207ENST00000413642 KRTAP6-2Q3LI66 62 aa7.59□□□□□ -1.19
VEGFA-207ENST00000413642 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
VEGFA-207ENST00000413642 KRTAP5-8O75690 187 aa7.4□□□□□ -1.22
VEGFA-207ENST00000413642 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
VEGFA-207ENST00000413642 MT3P25713 68 aa7.26□□□□□ -1.25
VEGFA-207ENST00000413642 OBSCNQ5VST9 7968 aa7.23□□□□□ -1.25
VEGFA-207ENST00000413642 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
VEGFA-207ENST00000413642 AHNAKQ09666 5890 aaKnown RBP7.03□□□□□ -1.28
VEGFA-207ENST00000413642 MUC5ACP98088 5654 aa6.99□□□□□ -1.29
VEGFA-207ENST00000413642 KRTAP5-1Q6L8H4 278 aa6.98□□□□□ -1.29
VEGFA-207ENST00000413642 MUC5BQ9HC84 5762 aaPredicted RBP6.97□□□□□ -1.29
VEGFA-207ENST00000413642 KRTAP9-9Q9BYP9 154 aa6.97□□□□□ -1.29
VEGFA-207ENST00000413642 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
VEGFA-207ENST00000413642 LCE1EQ5T753 118 aa6.63□□□□□ -1.35
VEGFA-207ENST00000413642 LCE1BQ5T7P3 118 aa6.34□□□□□ -1.39
VEGFA-207ENST00000413642 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
VEGFA-207ENST00000413642 H3BS24 57 aa6.28□□□□□ -1.4
VEGFA-207ENST00000413642 LCE1CQ5T751 118 aa6.16□□□□□ -1.42
VEGFA-207ENST00000413642 LCE3DQ9BYE3 92 aa6□□□□□ -1.45
VEGFA-207ENST00000413642 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
VEGFA-207ENST00000413642 LCE3EQ5T5B0 92 aa5.65□□□□□ -1.5
VEGFA-207ENST00000413642 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
VEGFA-207ENST00000413642 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
VEGFA-207ENST00000413642 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.6□□□□□ -1.51
VEGFA-207ENST00000413642 KRTAP5-11Q6L8G4 156 aa5.58□□□□□ -1.52
VEGFA-207ENST00000413642 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
VEGFA-207ENST00000413642 LCE1FQ5T754 118 aa5.39□□□□□ -1.55
VEGFA-207ENST00000413642 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
VEGFA-207ENST00000413642 PHGR1C9JFL3 82 aa4.88□□□□□ -1.63
VEGFA-207ENST00000413642 KRTAP4-4Q9BYR3 166 aa4.86□□□□□ -1.63
VEGFA-207ENST00000413642 INE1O15225 51 aa4.75□□□□□ -1.65
VEGFA-207ENST00000413642 MUC19Q7Z5P9 8384 aa4.46□□□□□ -1.69
VEGFA-207ENST00000413642 PRM1P04553 51 aa4.28□□□□□ -1.72
VEGFA-207ENST00000413642 KRTAP21-1Q3LI58 79 aa3.66□□□□□ -1.82
VEGFA-207ENST00000413642 MUC16Q8WXI7 14507 aa3.2□□□□□ -1.9
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms