RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
SIK3-202ENST00000413553 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
SIK3-202ENST00000413553 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
SIK3-202ENST00000413553 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
SIK3-202ENST00000413553 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
SIK3-202ENST00000413553 MT1LQ93083 61 aa2.99□□□□□ -1.93
SIK3-202ENST00000413553 MT1EP04732 61 aa2.96□□□□□ -1.94
SIK3-202ENST00000413553 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
SIK3-202ENST00000413553 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
SIK3-202ENST00000413553 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
SIK3-202ENST00000413553 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
SIK3-202ENST00000413553 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
SIK3-202ENST00000413553 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
SIK3-202ENST00000413553 MT1GP13640 62 aa2.86□□□□□ -1.95
SIK3-202ENST00000413553 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
SIK3-202ENST00000413553 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
SIK3-202ENST00000413553 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
SIK3-202ENST00000413553 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.84□□□□□ -1.96
SIK3-202ENST00000413553 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
SIK3-202ENST00000413553 MT1MQ8N339 61 aa2.79□□□□□ -1.96
SIK3-202ENST00000413553 SPRR2EP22531 72 aa2.78□□□□□ -1.96
SIK3-202ENST00000413553 SPRR2BP35325 72 aa2.78□□□□□ -1.96
SIK3-202ENST00000413553 SPRR2AP35326 72 aa2.78□□□□□ -1.96
SIK3-202ENST00000413553 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
SIK3-202ENST00000413553 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
SIK3-202ENST00000413553 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
SIK3-202ENST00000413553 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
SIK3-202ENST00000413553 LCE3BQ5TA77 95 aa2.72□□□□□ -1.97
SIK3-202ENST00000413553 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
SIK3-202ENST00000413553 KRTAP4-9Q9BYQ8 210 aa2.69□□□□□ -1.98
SIK3-202ENST00000413553 SPRR2DP22532 72 aa2.67□□□□□ -1.98
SIK3-202ENST00000413553 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
SIK3-202ENST00000413553 NEBP20929 6669 aa2.61□□□□□ -1.99
SIK3-202ENST00000413553 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SIK3-202ENST00000413553 MT1AP04731 61 aa2.57□□□□□ -2
SIK3-202ENST00000413553 PRM1P04553 51 aa2.57□□□□□ -2
SIK3-202ENST00000413553 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
SIK3-202ENST00000413553 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
SIK3-202ENST00000413553 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
SIK3-202ENST00000413553 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
SIK3-202ENST00000413553 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
SIK3-202ENST00000413553 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
SIK3-202ENST00000413553 MT4P47944 62 aa2.36□□□□□ -2.03
SIK3-202ENST00000413553 KRTAP4-6Q9BYQ5 205 aa2.35□□□□□ -2.03
SIK3-202ENST00000413553 KRTAP9-4Q9BYQ2 154 aa2.34□□□□□ -2.04
SIK3-202ENST00000413553 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
SIK3-202ENST00000413553 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
SIK3-202ENST00000413553 MT3P25713 68 aa2.26□□□□□ -2.05
SIK3-202ENST00000413553 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
SIK3-202ENST00000413553 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
SIK3-202ENST00000413553 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
SIK3-202ENST00000413553 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
SIK3-202ENST00000413553 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
SIK3-202ENST00000413553 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
SIK3-202ENST00000413553 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SIK3-202ENST00000413553 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
SIK3-202ENST00000413553 KRTAP4-11Q9BYQ6 195 aa1.94□□□□□ -2.1
SIK3-202ENST00000413553 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
SIK3-202ENST00000413553 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
SIK3-202ENST00000413553 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
SIK3-202ENST00000413553 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.1
SIK3-202ENST00000413553 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
SIK3-202ENST00000413553 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.12
SIK3-202ENST00000413553 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
SIK3-202ENST00000413553 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
SIK3-202ENST00000413553 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
SIK3-202ENST00000413553 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
SIK3-202ENST00000413553 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
SIK3-202ENST00000413553 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
SIK3-202ENST00000413553 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
SIK3-202ENST00000413553 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
SIK3-202ENST00000413553 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
SIK3-202ENST00000413553 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
SIK3-202ENST00000413553 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
SIK3-202ENST00000413553 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
SIK3-202ENST00000413553 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
SIK3-202ENST00000413553 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
SIK3-202ENST00000413553 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 291.3 ms