RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 UQCR11O14957 56 aa3.6□□□□□ -1.83
NCKIPSD-202ENST00000413374 MT1MQ8N339 61 aa3.6□□□□□ -1.83
NCKIPSD-202ENST00000413374 SVIPQ8NHG7 77 aa3.6□□□□□ -1.83
NCKIPSD-202ENST00000413374 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
NCKIPSD-202ENST00000413374 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
NCKIPSD-202ENST00000413374 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
NCKIPSD-202ENST00000413374 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
NCKIPSD-202ENST00000413374 PSPHP1O15172 72 aa3.5□□□□□ -1.85
NCKIPSD-202ENST00000413374 MT4P47944 62 aa3.5□□□□□ -1.85
NCKIPSD-202ENST00000413374 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
NCKIPSD-202ENST00000413374 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
NCKIPSD-202ENST00000413374 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
NCKIPSD-202ENST00000413374 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
NCKIPSD-202ENST00000413374 K7ERS5 55 aa3.45□□□□□ -1.86
NCKIPSD-202ENST00000413374 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
NCKIPSD-202ENST00000413374 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
NCKIPSD-202ENST00000413374 V9GYY9 64 aa3.43□□□□□ -1.86
NCKIPSD-202ENST00000413374 Q1T7F1 81 aa3.42□□□□□ -1.86
NCKIPSD-202ENST00000413374 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
NCKIPSD-202ENST00000413374 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
NCKIPSD-202ENST00000413374 A6NED7 52 aa3.36□□□□□ -1.87
NCKIPSD-202ENST00000413374 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
NCKIPSD-202ENST00000413374 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
NCKIPSD-202ENST00000413374 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
NCKIPSD-202ENST00000413374 KRTAP23-1A1A580 65 aa3.27□□□□□ -1.89
NCKIPSD-202ENST00000413374 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
NCKIPSD-202ENST00000413374 CDC42SE1Q9NRR8 79 aa3.27□□□□□ -1.89
NCKIPSD-202ENST00000413374 ROMO1P60602 79 aa3.23□□□□□ -1.89
NCKIPSD-202ENST00000413374 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
NCKIPSD-202ENST00000413374 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
NCKIPSD-202ENST00000413374 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
NCKIPSD-202ENST00000413374 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
NCKIPSD-202ENST00000413374 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
NCKIPSD-202ENST00000413374 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
NCKIPSD-202ENST00000413374 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
NCKIPSD-202ENST00000413374 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
NCKIPSD-202ENST00000413374 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
NCKIPSD-202ENST00000413374 BRK1Q8WUW1 75 aa3.12□□□□□ -1.91
NCKIPSD-202ENST00000413374 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
NCKIPSD-202ENST00000413374 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
NCKIPSD-202ENST00000413374 MT1AP04731 61 aa3.07□□□□□ -1.92
NCKIPSD-202ENST00000413374 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
NCKIPSD-202ENST00000413374 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
NCKIPSD-202ENST00000413374 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
NCKIPSD-202ENST00000413374 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
NCKIPSD-202ENST00000413374 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
NCKIPSD-202ENST00000413374 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
NCKIPSD-202ENST00000413374 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
NCKIPSD-202ENST00000413374 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
NCKIPSD-202ENST00000413374 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
NCKIPSD-202ENST00000413374 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
NCKIPSD-202ENST00000413374 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
NCKIPSD-202ENST00000413374 MT3P25713 68 aa2.82□□□□□ -1.96
NCKIPSD-202ENST00000413374 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
NCKIPSD-202ENST00000413374 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
NCKIPSD-202ENST00000413374 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
NCKIPSD-202ENST00000413374 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
NCKIPSD-202ENST00000413374 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
NCKIPSD-202ENST00000413374 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
NCKIPSD-202ENST00000413374 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
NCKIPSD-202ENST00000413374 LCE1EQ5T753 118 aa2.54□□□□□ -2
NCKIPSD-202ENST00000413374 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
NCKIPSD-202ENST00000413374 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
NCKIPSD-202ENST00000413374 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
NCKIPSD-202ENST00000413374 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
NCKIPSD-202ENST00000413374 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
NCKIPSD-202ENST00000413374 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
NCKIPSD-202ENST00000413374 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
NCKIPSD-202ENST00000413374 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
NCKIPSD-202ENST00000413374 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
NCKIPSD-202ENST00000413374 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
NCKIPSD-202ENST00000413374 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
NCKIPSD-202ENST00000413374 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
NCKIPSD-202ENST00000413374 INE1O15225 51 aa1.75□□□□□ -2.13
NCKIPSD-202ENST00000413374 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
NCKIPSD-202ENST00000413374 PRM1P04553 51 aa1.67□□□□□ -2.14
NCKIPSD-202ENST00000413374 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
NCKIPSD-202ENST00000413374 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 73 ms