RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 A0A1B0GU69 56 aa6.58□□□□□ -1.36
CPSF7-204ENST00000413232 TNP1P09430 55 aa6.57□□□□□ -1.36
CPSF7-204ENST00000413232 KRTAP5-10Q6L8G5 202 aa6.57□□□□□ -1.36
CPSF7-204ENST00000413232 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
CPSF7-204ENST00000413232 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
CPSF7-204ENST00000413232 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
CPSF7-204ENST00000413232 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
CPSF7-204ENST00000413232 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-204ENST00000413232 KRTAP5-7Q6L8G8 165 aa6.32□□□□□ -1.4
CPSF7-204ENST00000413232 ANAPC13Q9BS18 74 aa6.23□□□□□ -1.41
CPSF7-204ENST00000413232 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
CPSF7-204ENST00000413232 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
CPSF7-204ENST00000413232 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
CPSF7-204ENST00000413232 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
CPSF7-204ENST00000413232 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
CPSF7-204ENST00000413232 KRTAP12-4P60329 112 aa6.15□□□□□ -1.42
CPSF7-204ENST00000413232 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
CPSF7-204ENST00000413232 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
CPSF7-204ENST00000413232 UQCR11O14957 56 aa6.07□□□□□ -1.44
CPSF7-204ENST00000413232 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
CPSF7-204ENST00000413232 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
CPSF7-204ENST00000413232 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
CPSF7-204ENST00000413232 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
CPSF7-204ENST00000413232 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
CPSF7-204ENST00000413232 TMEM258P61165 79 aa5.85□□□□□ -1.47
CPSF7-204ENST00000413232 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
CPSF7-204ENST00000413232 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
CPSF7-204ENST00000413232 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
CPSF7-204ENST00000413232 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
CPSF7-204ENST00000413232 K7ERS5 55 aa5.78□□□□□ -1.48
CPSF7-204ENST00000413232 MT1AP04731 61 aa5.78□□□□□ -1.48
CPSF7-204ENST00000413232 PSPHP1O15172 72 aa5.71□□□□□ -1.5
CPSF7-204ENST00000413232 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
CPSF7-204ENST00000413232 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
CPSF7-204ENST00000413232 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
CPSF7-204ENST00000413232 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
CPSF7-204ENST00000413232 Q1T7F1 81 aa5.58□□□□□ -1.52
CPSF7-204ENST00000413232 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
CPSF7-204ENST00000413232 V9GYY9 64 aa5.56□□□□□ -1.52
CPSF7-204ENST00000413232 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
CPSF7-204ENST00000413232 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
CPSF7-204ENST00000413232 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
CPSF7-204ENST00000413232 A6NED7 52 aa5.44□□□□□ -1.54
CPSF7-204ENST00000413232 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-204ENST00000413232 ROMO1P60602 79 aa5.41□□□□□ -1.54
CPSF7-204ENST00000413232 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
CPSF7-204ENST00000413232 AHNAKQ09666 5890 aaKnown RBP5.4□□□□□ -1.55
CPSF7-204ENST00000413232 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
CPSF7-204ENST00000413232 PCP4P48539 62 aa5.3□□□□□ -1.56
CPSF7-204ENST00000413232 KRTAP5-1Q6L8H4 278 aa5.28□□□□□ -1.56
CPSF7-204ENST00000413232 MT3P25713 68 aa5.27□□□□□ -1.57
CPSF7-204ENST00000413232 LCE1EQ5T753 118 aa4.9□□□□□ -1.63
CPSF7-204ENST00000413232 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
CPSF7-204ENST00000413232 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
CPSF7-204ENST00000413232 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
CPSF7-204ENST00000413232 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
CPSF7-204ENST00000413232 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
CPSF7-204ENST00000413232 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
CPSF7-204ENST00000413232 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
CPSF7-204ENST00000413232 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
CPSF7-204ENST00000413232 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
CPSF7-204ENST00000413232 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
CPSF7-204ENST00000413232 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
CPSF7-204ENST00000413232 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
CPSF7-204ENST00000413232 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
CPSF7-204ENST00000413232 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
CPSF7-204ENST00000413232 H3BS24 57 aa3.86□□□□□ -1.79
CPSF7-204ENST00000413232 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
CPSF7-204ENST00000413232 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
CPSF7-204ENST00000413232 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CPSF7-204ENST00000413232 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
CPSF7-204ENST00000413232 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
CPSF7-204ENST00000413232 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
CPSF7-204ENST00000413232 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
CPSF7-204ENST00000413232 INE1O15225 51 aa2.87□□□□□ -1.95
CPSF7-204ENST00000413232 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
CPSF7-204ENST00000413232 PRM1P04553 51 aa2.79□□□□□ -1.96
CPSF7-204ENST00000413232 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms