RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 MT4P47944 62 aa6.73□□□□□ -1.33
ITGA6-204ENST00000412899 V9GYY9 64 aa6.73□□□□□ -1.33
ITGA6-204ENST00000412899 MIR22HGQ0VDD5 57 aa6.72□□□□□ -1.33
ITGA6-204ENST00000412899 PSPHP1O15172 72 aa6.69□□□□□ -1.34
ITGA6-204ENST00000412899 Q1T7F1 81 aa6.68□□□□□ -1.34
ITGA6-204ENST00000412899 LCE3AQ5TA76 89 aa6.65□□□□□ -1.34
ITGA6-204ENST00000412899 MT1MQ8N339 61 aa6.65□□□□□ -1.34
ITGA6-204ENST00000412899 MT1LQ93083 61 aa6.59□□□□□ -1.35
ITGA6-204ENST00000412899 K7ERS5 55 aa6.58□□□□□ -1.36
ITGA6-204ENST00000412899 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
ITGA6-204ENST00000412899 PCP4P48539 62 aa6.52□□□□□ -1.37
ITGA6-204ENST00000412899 KRTAP5-4Q6L8H1 288 aa6.52□□□□□ -1.37
ITGA6-204ENST00000412899 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
ITGA6-204ENST00000412899 KRTAP5-10Q6L8G5 202 aa6.49□□□□□ -1.37
ITGA6-204ENST00000412899 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
ITGA6-204ENST00000412899 A6NED7 52 aa6.47□□□□□ -1.37
ITGA6-204ENST00000412899 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.38
ITGA6-204ENST00000412899 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
ITGA6-204ENST00000412899 AHNAK2Q8IVF2 5795 aa6.41□□□□□ -1.38
ITGA6-204ENST00000412899 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
ITGA6-204ENST00000412899 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
ITGA6-204ENST00000412899 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
ITGA6-204ENST00000412899 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
ITGA6-204ENST00000412899 CDC42SE1Q9NRR8 79 aa6.24□□□□□ -1.41
ITGA6-204ENST00000412899 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
ITGA6-204ENST00000412899 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
ITGA6-204ENST00000412899 ROMO1P60602 79 aa6.14□□□□□ -1.43
ITGA6-204ENST00000412899 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
ITGA6-204ENST00000412899 KRTAP5-5Q701N2 237 aaPredicted RBP6.1□□□□□ -1.43
ITGA6-204ENST00000412899 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
ITGA6-204ENST00000412899 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
ITGA6-204ENST00000412899 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
ITGA6-204ENST00000412899 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
ITGA6-204ENST00000412899 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
ITGA6-204ENST00000412899 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
ITGA6-204ENST00000412899 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
ITGA6-204ENST00000412899 BRK1Q8WUW1 75 aa5.72□□□□□ -1.49
ITGA6-204ENST00000412899 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
ITGA6-204ENST00000412899 MT1AP04731 61 aa5.61□□□□□ -1.51
ITGA6-204ENST00000412899 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
ITGA6-204ENST00000412899 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
ITGA6-204ENST00000412899 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
ITGA6-204ENST00000412899 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
ITGA6-204ENST00000412899 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
ITGA6-204ENST00000412899 PMAIP1Q13794 54 aa5.39□□□□□ -1.55
ITGA6-204ENST00000412899 MUC5ACP98088 5654 aa5.38□□□□□ -1.55
ITGA6-204ENST00000412899 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
ITGA6-204ENST00000412899 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.56
ITGA6-204ENST00000412899 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
ITGA6-204ENST00000412899 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
ITGA6-204ENST00000412899 MT3P25713 68 aa5.16□□□□□ -1.58
ITGA6-204ENST00000412899 PRAC1Q96KF2 57 aa5.15□□□□□ -1.59
ITGA6-204ENST00000412899 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
ITGA6-204ENST00000412899 H3BS24 57 aa5.08□□□□□ -1.6
ITGA6-204ENST00000412899 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
ITGA6-204ENST00000412899 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
ITGA6-204ENST00000412899 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
ITGA6-204ENST00000412899 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
ITGA6-204ENST00000412899 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
ITGA6-204ENST00000412899 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
ITGA6-204ENST00000412899 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
ITGA6-204ENST00000412899 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
ITGA6-204ENST00000412899 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
ITGA6-204ENST00000412899 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
ITGA6-204ENST00000412899 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
ITGA6-204ENST00000412899 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
ITGA6-204ENST00000412899 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
ITGA6-204ENST00000412899 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
ITGA6-204ENST00000412899 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
ITGA6-204ENST00000412899 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
ITGA6-204ENST00000412899 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
ITGA6-204ENST00000412899 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
ITGA6-204ENST00000412899 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
ITGA6-204ENST00000412899 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
ITGA6-204ENST00000412899 PRM1P04553 51 aa3.15□□□□□ -1.91
ITGA6-204ENST00000412899 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
ITGA6-204ENST00000412899 INE1O15225 51 aa2.89□□□□□ -1.95
ITGA6-204ENST00000412899 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 276.9 ms