RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
CUBNP1-201ENST00000412710 UBR4Q5T4S7 5183 aa3.44□□□□□ -1.86
CUBNP1-201ENST00000412710 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
CUBNP1-201ENST00000412710 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CUBNP1-201ENST00000412710 MT3P25713 68 aa3.34□□□□□ -1.87
CUBNP1-201ENST00000412710 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
CUBNP1-201ENST00000412710 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
CUBNP1-201ENST00000412710 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
CUBNP1-201ENST00000412710 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
CUBNP1-201ENST00000412710 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
CUBNP1-201ENST00000412710 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
CUBNP1-201ENST00000412710 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
CUBNP1-201ENST00000412710 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
CUBNP1-201ENST00000412710 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
CUBNP1-201ENST00000412710 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
CUBNP1-201ENST00000412710 MT1LQ93083 61 aa3.12□□□□□ -1.91
CUBNP1-201ENST00000412710 MT1EP04732 61 aa3.1□□□□□ -1.91
CUBNP1-201ENST00000412710 USH2AO75445 5202 aa3.06□□□□□ -1.92
CUBNP1-201ENST00000412710 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
CUBNP1-201ENST00000412710 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
CUBNP1-201ENST00000412710 KMT2DO14686 5537 aa2.96□□□□□ -1.94
CUBNP1-201ENST00000412710 MT1GP13640 62 aa2.92□□□□□ -1.94
CUBNP1-201ENST00000412710 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
CUBNP1-201ENST00000412710 MT1MQ8N339 61 aa2.89□□□□□ -1.95
CUBNP1-201ENST00000412710 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
CUBNP1-201ENST00000412710 MT1AP04731 61 aa2.74□□□□□ -1.97
CUBNP1-201ENST00000412710 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
CUBNP1-201ENST00000412710 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
CUBNP1-201ENST00000412710 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
CUBNP1-201ENST00000412710 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
CUBNP1-201ENST00000412710 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
CUBNP1-201ENST00000412710 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
CUBNP1-201ENST00000412710 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
CUBNP1-201ENST00000412710 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
CUBNP1-201ENST00000412710 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
CUBNP1-201ENST00000412710 KRTAP5-9P26371 169 aa2.57□□□□□ -2
CUBNP1-201ENST00000412710 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
CUBNP1-201ENST00000412710 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
CUBNP1-201ENST00000412710 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
CUBNP1-201ENST00000412710 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
CUBNP1-201ENST00000412710 PRM1P04553 51 aa2.41□□□□□ -2.02
CUBNP1-201ENST00000412710 SPRR2EP22531 72 aa2.41□□□□□ -2.02
CUBNP1-201ENST00000412710 SPRR2BP35325 72 aa2.41□□□□□ -2.02
CUBNP1-201ENST00000412710 SPRR2AP35326 72 aa2.41□□□□□ -2.02
CUBNP1-201ENST00000412710 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
CUBNP1-201ENST00000412710 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
CUBNP1-201ENST00000412710 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
CUBNP1-201ENST00000412710 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
CUBNP1-201ENST00000412710 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
CUBNP1-201ENST00000412710 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
CUBNP1-201ENST00000412710 SPRR2DP22532 72 aa2.32□□□□□ -2.04
CUBNP1-201ENST00000412710 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
CUBNP1-201ENST00000412710 NEBP20929 6669 aa2.26□□□□□ -2.05
CUBNP1-201ENST00000412710 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
CUBNP1-201ENST00000412710 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
CUBNP1-201ENST00000412710 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
CUBNP1-201ENST00000412710 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
CUBNP1-201ENST00000412710 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
CUBNP1-201ENST00000412710 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
CUBNP1-201ENST00000412710 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
CUBNP1-201ENST00000412710 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
CUBNP1-201ENST00000412710 MT4P47944 62 aa1.97□□□□□ -2.09
CUBNP1-201ENST00000412710 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
CUBNP1-201ENST00000412710 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
CUBNP1-201ENST00000412710 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
CUBNP1-201ENST00000412710 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CUBNP1-201ENST00000412710 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CUBNP1-201ENST00000412710 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
CUBNP1-201ENST00000412710 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
CUBNP1-201ENST00000412710 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
CUBNP1-201ENST00000412710 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
CUBNP1-201ENST00000412710 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
CUBNP1-201ENST00000412710 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
CUBNP1-201ENST00000412710 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CUBNP1-201ENST00000412710 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
CUBNP1-201ENST00000412710 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
CUBNP1-201ENST00000412710 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 40.9 ms