RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 PP632Q6XCG6 107 aa6.12□□□□□ -1.43
HSPG2-204ENST00000412328 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
HSPG2-204ENST00000412328 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
HSPG2-204ENST00000412328 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
HSPG2-204ENST00000412328 Q1T7F1 81 aa6□□□□□ -1.45
HSPG2-204ENST00000412328 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
HSPG2-204ENST00000412328 PSPHP1O15172 72 aa5.96□□□□□ -1.46
HSPG2-204ENST00000412328 V9GYY9 64 aa5.95□□□□□ -1.46
HSPG2-204ENST00000412328 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
HSPG2-204ENST00000412328 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
HSPG2-204ENST00000412328 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
HSPG2-204ENST00000412328 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
HSPG2-204ENST00000412328 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
HSPG2-204ENST00000412328 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.47
HSPG2-204ENST00000412328 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
HSPG2-204ENST00000412328 K7ERS5 55 aa5.81□□□□□ -1.48
HSPG2-204ENST00000412328 MT4P47944 62 aa5.81□□□□□ -1.48
HSPG2-204ENST00000412328 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
HSPG2-204ENST00000412328 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
HSPG2-204ENST00000412328 A6NED7 52 aa5.72□□□□□ -1.49
HSPG2-204ENST00000412328 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
HSPG2-204ENST00000412328 AHNAK2Q8IVF2 5795 aa5.67□□□□□ -1.5
HSPG2-204ENST00000412328 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
HSPG2-204ENST00000412328 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
HSPG2-204ENST00000412328 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
HSPG2-204ENST00000412328 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
HSPG2-204ENST00000412328 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
HSPG2-204ENST00000412328 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
HSPG2-204ENST00000412328 ROMO1P60602 79 aa5.53□□□□□ -1.52
HSPG2-204ENST00000412328 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
HSPG2-204ENST00000412328 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
HSPG2-204ENST00000412328 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
HSPG2-204ENST00000412328 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
HSPG2-204ENST00000412328 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
HSPG2-204ENST00000412328 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
HSPG2-204ENST00000412328 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
HSPG2-204ENST00000412328 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
HSPG2-204ENST00000412328 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
HSPG2-204ENST00000412328 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
HSPG2-204ENST00000412328 MT1AP04731 61 aa5.29□□□□□ -1.56
HSPG2-204ENST00000412328 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
HSPG2-204ENST00000412328 KRTAP5-7Q6L8G8 165 aa5.27□□□□□ -1.57
HSPG2-204ENST00000412328 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
HSPG2-204ENST00000412328 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
HSPG2-204ENST00000412328 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
HSPG2-204ENST00000412328 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
HSPG2-204ENST00000412328 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
HSPG2-204ENST00000412328 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
HSPG2-204ENST00000412328 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
HSPG2-204ENST00000412328 MT3P25713 68 aa4.77□□□□□ -1.65
HSPG2-204ENST00000412328 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
HSPG2-204ENST00000412328 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
HSPG2-204ENST00000412328 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
HSPG2-204ENST00000412328 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
HSPG2-204ENST00000412328 AHNAKQ09666 5890 aaKnown RBP4.6□□□□□ -1.67
HSPG2-204ENST00000412328 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
HSPG2-204ENST00000412328 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
HSPG2-204ENST00000412328 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
HSPG2-204ENST00000412328 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
HSPG2-204ENST00000412328 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
HSPG2-204ENST00000412328 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
HSPG2-204ENST00000412328 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
HSPG2-204ENST00000412328 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
HSPG2-204ENST00000412328 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
HSPG2-204ENST00000412328 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
HSPG2-204ENST00000412328 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
HSPG2-204ENST00000412328 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
HSPG2-204ENST00000412328 H3BS24 57 aa3.62□□□□□ -1.83
HSPG2-204ENST00000412328 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
HSPG2-204ENST00000412328 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
HSPG2-204ENST00000412328 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
HSPG2-204ENST00000412328 INE1O15225 51 aa3.36□□□□□ -1.87
HSPG2-204ENST00000412328 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
HSPG2-204ENST00000412328 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
HSPG2-204ENST00000412328 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
HSPG2-204ENST00000412328 PRM1P04553 51 aa2.85□□□□□ -1.95
HSPG2-204ENST00000412328 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
HSPG2-204ENST00000412328 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms