RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 K7ERS5 55 aa5.83□□□□□ -1.48
DDR1-230ENST00000412274 Q1T7F1 81 aa5.82□□□□□ -1.48
DDR1-230ENST00000412274 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
DDR1-230ENST00000412274 MT1LQ93083 61 aa5.76□□□□□ -1.49
DDR1-230ENST00000412274 PSPHP1O15172 72 aa5.74□□□□□ -1.49
DDR1-230ENST00000412274 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
DDR1-230ENST00000412274 MT1MQ8N339 61 aa5.71□□□□□ -1.5
DDR1-230ENST00000412274 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
DDR1-230ENST00000412274 A6NED7 52 aa5.61□□□□□ -1.51
DDR1-230ENST00000412274 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
DDR1-230ENST00000412274 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
DDR1-230ENST00000412274 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
DDR1-230ENST00000412274 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
DDR1-230ENST00000412274 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
DDR1-230ENST00000412274 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
DDR1-230ENST00000412274 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
DDR1-230ENST00000412274 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
DDR1-230ENST00000412274 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
DDR1-230ENST00000412274 MT4P47944 62 aa5.38□□□□□ -1.55
DDR1-230ENST00000412274 ROMO1P60602 79 aa5.37□□□□□ -1.55
DDR1-230ENST00000412274 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
DDR1-230ENST00000412274 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
DDR1-230ENST00000412274 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
DDR1-230ENST00000412274 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
DDR1-230ENST00000412274 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
DDR1-230ENST00000412274 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
DDR1-230ENST00000412274 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
DDR1-230ENST00000412274 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
DDR1-230ENST00000412274 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
DDR1-230ENST00000412274 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
DDR1-230ENST00000412274 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
DDR1-230ENST00000412274 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
DDR1-230ENST00000412274 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.6
DDR1-230ENST00000412274 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
DDR1-230ENST00000412274 PMAIP1Q13794 54 aa5□□□□□ -1.61
DDR1-230ENST00000412274 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
DDR1-230ENST00000412274 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
DDR1-230ENST00000412274 MT1AP04731 61 aa4.93□□□□□ -1.62
DDR1-230ENST00000412274 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
DDR1-230ENST00000412274 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
DDR1-230ENST00000412274 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
DDR1-230ENST00000412274 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
DDR1-230ENST00000412274 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
DDR1-230ENST00000412274 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
DDR1-230ENST00000412274 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
DDR1-230ENST00000412274 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
DDR1-230ENST00000412274 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
DDR1-230ENST00000412274 MT3P25713 68 aa4.55□□□□□ -1.68
DDR1-230ENST00000412274 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
DDR1-230ENST00000412274 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
DDR1-230ENST00000412274 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
DDR1-230ENST00000412274 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
DDR1-230ENST00000412274 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
DDR1-230ENST00000412274 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
DDR1-230ENST00000412274 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
DDR1-230ENST00000412274 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
DDR1-230ENST00000412274 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
DDR1-230ENST00000412274 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
DDR1-230ENST00000412274 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
DDR1-230ENST00000412274 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
DDR1-230ENST00000412274 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
DDR1-230ENST00000412274 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
DDR1-230ENST00000412274 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
DDR1-230ENST00000412274 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
DDR1-230ENST00000412274 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
DDR1-230ENST00000412274 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
DDR1-230ENST00000412274 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
DDR1-230ENST00000412274 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
DDR1-230ENST00000412274 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
DDR1-230ENST00000412274 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
DDR1-230ENST00000412274 INE1O15225 51 aa3.04□□□□□ -1.92
DDR1-230ENST00000412274 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
DDR1-230ENST00000412274 H3BS24 57 aa2.86□□□□□ -1.95
DDR1-230ENST00000412274 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
DDR1-230ENST00000412274 PRM1P04553 51 aa2.7□□□□□ -1.98
DDR1-230ENST00000412274 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
DDR1-230ENST00000412274 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
DDR1-230ENST00000412274 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 108.3 ms