RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
ITSN2-205ENST00000412011 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
ITSN2-205ENST00000412011 KRTAP9-6A8MVA2 160 aa7.04□□□□□ -1.28
ITSN2-205ENST00000412011 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
ITSN2-205ENST00000412011 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
ITSN2-205ENST00000412011 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
ITSN2-205ENST00000412011 MUC12Q9UKN1 5478 aa7.01□□□□□ -1.29
ITSN2-205ENST00000412011 MT1GP13640 62 aa6.97□□□□□ -1.29
ITSN2-205ENST00000412011 MT1MQ8N339 61 aa6.94□□□□□ -1.3
ITSN2-205ENST00000412011 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
ITSN2-205ENST00000412011 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
ITSN2-205ENST00000412011 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
ITSN2-205ENST00000412011 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
ITSN2-205ENST00000412011 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
ITSN2-205ENST00000412011 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
ITSN2-205ENST00000412011 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
ITSN2-205ENST00000412011 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
ITSN2-205ENST00000412011 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
ITSN2-205ENST00000412011 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
ITSN2-205ENST00000412011 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
ITSN2-205ENST00000412011 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
ITSN2-205ENST00000412011 SPRR2EP22531 72 aa6.58□□□□□ -1.36
ITSN2-205ENST00000412011 SPRR2BP35325 72 aa6.58□□□□□ -1.36
ITSN2-205ENST00000412011 SPRR2AP35326 72 aa6.58□□□□□ -1.36
ITSN2-205ENST00000412011 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
ITSN2-205ENST00000412011 NEBP20929 6669 aa6.38□□□□□ -1.39
ITSN2-205ENST00000412011 SPRR2DP22532 72 aa6.32□□□□□ -1.4
ITSN2-205ENST00000412011 INE1O15225 51 aa6.27□□□□□ -1.41
ITSN2-205ENST00000412011 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
ITSN2-205ENST00000412011 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
ITSN2-205ENST00000412011 MT1AP04731 61 aa6.17□□□□□ -1.42
ITSN2-205ENST00000412011 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
ITSN2-205ENST00000412011 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
ITSN2-205ENST00000412011 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
ITSN2-205ENST00000412011 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
ITSN2-205ENST00000412011 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
ITSN2-205ENST00000412011 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
ITSN2-205ENST00000412011 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
ITSN2-205ENST00000412011 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
ITSN2-205ENST00000412011 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
ITSN2-205ENST00000412011 KRTAP6-2Q3LI66 62 aa5.62□□□□□ -1.51
ITSN2-205ENST00000412011 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
ITSN2-205ENST00000412011 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
ITSN2-205ENST00000412011 MT3P25713 68 aa5.56□□□□□ -1.52
ITSN2-205ENST00000412011 MT4P47944 62 aa5.51□□□□□ -1.53
ITSN2-205ENST00000412011 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
ITSN2-205ENST00000412011 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
ITSN2-205ENST00000412011 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
ITSN2-205ENST00000412011 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
ITSN2-205ENST00000412011 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
ITSN2-205ENST00000412011 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
ITSN2-205ENST00000412011 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
ITSN2-205ENST00000412011 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
ITSN2-205ENST00000412011 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
ITSN2-205ENST00000412011 PRM1P04553 51 aa4.94□□□□□ -1.62
ITSN2-205ENST00000412011 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
ITSN2-205ENST00000412011 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
ITSN2-205ENST00000412011 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
ITSN2-205ENST00000412011 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
ITSN2-205ENST00000412011 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
ITSN2-205ENST00000412011 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
ITSN2-205ENST00000412011 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
ITSN2-205ENST00000412011 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
ITSN2-205ENST00000412011 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
ITSN2-205ENST00000412011 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
ITSN2-205ENST00000412011 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
ITSN2-205ENST00000412011 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
ITSN2-205ENST00000412011 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
ITSN2-205ENST00000412011 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
ITSN2-205ENST00000412011 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
ITSN2-205ENST00000412011 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
ITSN2-205ENST00000412011 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
ITSN2-205ENST00000412011 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
ITSN2-205ENST00000412011 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
ITSN2-205ENST00000412011 PHGR1C9JFL3 82 aa3.34□□□□□ -1.88
ITSN2-205ENST00000412011 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
ITSN2-205ENST00000412011 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
ITSN2-205ENST00000412011 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 131.3 ms