RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
SUMO3-204ENST00000411651 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
SUMO3-204ENST00000411651 KRTAP19-3Q7Z4W3 81 aa6.84□□□□□ -1.32
SUMO3-204ENST00000411651 MT1GP13640 62 aa6.82□□□□□ -1.32
SUMO3-204ENST00000411651 SYNE2Q8WXH0 6885 aaKnown RBP6.78□□□□□ -1.32
SUMO3-204ENST00000411651 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
SUMO3-204ENST00000411651 MT1MQ8N339 61 aa6.74□□□□□ -1.33
SUMO3-204ENST00000411651 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
SUMO3-204ENST00000411651 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
SUMO3-204ENST00000411651 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.34
SUMO3-204ENST00000411651 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.34
SUMO3-204ENST00000411651 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
SUMO3-204ENST00000411651 INE1O15225 51 aa6.62□□□□□ -1.35
SUMO3-204ENST00000411651 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
SUMO3-204ENST00000411651 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
SUMO3-204ENST00000411651 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
SUMO3-204ENST00000411651 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
SUMO3-204ENST00000411651 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
SUMO3-204ENST00000411651 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.39
SUMO3-204ENST00000411651 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
SUMO3-204ENST00000411651 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
SUMO3-204ENST00000411651 SPRR2EP22531 72 aa6.21□□□□□ -1.41
SUMO3-204ENST00000411651 SPRR2BP35325 72 aa6.21□□□□□ -1.41
SUMO3-204ENST00000411651 SPRR2AP35326 72 aa6.21□□□□□ -1.41
SUMO3-204ENST00000411651 NEBP20929 6669 aa6.18□□□□□ -1.42
SUMO3-204ENST00000411651 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
SUMO3-204ENST00000411651 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
SUMO3-204ENST00000411651 MT1AP04731 61 aa6.06□□□□□ -1.44
SUMO3-204ENST00000411651 SPRR2DP22532 72 aa5.97□□□□□ -1.45
SUMO3-204ENST00000411651 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
SUMO3-204ENST00000411651 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
SUMO3-204ENST00000411651 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.5
SUMO3-204ENST00000411651 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
SUMO3-204ENST00000411651 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
SUMO3-204ENST00000411651 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
SUMO3-204ENST00000411651 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
SUMO3-204ENST00000411651 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
SUMO3-204ENST00000411651 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
SUMO3-204ENST00000411651 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
SUMO3-204ENST00000411651 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
SUMO3-204ENST00000411651 MT3P25713 68 aa5.47□□□□□ -1.53
SUMO3-204ENST00000411651 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.53
SUMO3-204ENST00000411651 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
SUMO3-204ENST00000411651 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
SUMO3-204ENST00000411651 MT4P47944 62 aa5.19□□□□□ -1.58
SUMO3-204ENST00000411651 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
SUMO3-204ENST00000411651 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
SUMO3-204ENST00000411651 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.58
SUMO3-204ENST00000411651 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
SUMO3-204ENST00000411651 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
SUMO3-204ENST00000411651 PRM1P04553 51 aa4.94□□□□□ -1.62
SUMO3-204ENST00000411651 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
SUMO3-204ENST00000411651 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
SUMO3-204ENST00000411651 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
SUMO3-204ENST00000411651 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
SUMO3-204ENST00000411651 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
SUMO3-204ENST00000411651 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
SUMO3-204ENST00000411651 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
SUMO3-204ENST00000411651 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
SUMO3-204ENST00000411651 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
SUMO3-204ENST00000411651 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SUMO3-204ENST00000411651 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
SUMO3-204ENST00000411651 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
SUMO3-204ENST00000411651 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
SUMO3-204ENST00000411651 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
SUMO3-204ENST00000411651 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
SUMO3-204ENST00000411651 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.74
SUMO3-204ENST00000411651 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
SUMO3-204ENST00000411651 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
SUMO3-204ENST00000411651 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
SUMO3-204ENST00000411651 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
SUMO3-204ENST00000411651 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SUMO3-204ENST00000411651 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
SUMO3-204ENST00000411651 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SUMO3-204ENST00000411651 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.9
SUMO3-204ENST00000411651 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SUMO3-204ENST00000411651 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms