RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
HOXD3-202ENST00000410016 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
HOXD3-202ENST00000410016 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
HOXD3-202ENST00000410016 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
HOXD3-202ENST00000410016 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
HOXD3-202ENST00000410016 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
HOXD3-202ENST00000410016 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
HOXD3-202ENST00000410016 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
HOXD3-202ENST00000410016 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
HOXD3-202ENST00000410016 MT1MQ8N339 61 aa5.16□□□□□ -1.58
HOXD3-202ENST00000410016 MT1GP13640 62 aa5.16□□□□□ -1.58
HOXD3-202ENST00000410016 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
HOXD3-202ENST00000410016 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
HOXD3-202ENST00000410016 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
HOXD3-202ENST00000410016 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
HOXD3-202ENST00000410016 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
HOXD3-202ENST00000410016 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
HOXD3-202ENST00000410016 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
HOXD3-202ENST00000410016 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
HOXD3-202ENST00000410016 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
HOXD3-202ENST00000410016 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
HOXD3-202ENST00000410016 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
HOXD3-202ENST00000410016 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
HOXD3-202ENST00000410016 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
HOXD3-202ENST00000410016 MT1AP04731 61 aa4.63□□□□□ -1.67
HOXD3-202ENST00000410016 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
HOXD3-202ENST00000410016 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
HOXD3-202ENST00000410016 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
HOXD3-202ENST00000410016 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
HOXD3-202ENST00000410016 SPRR2EP22531 72 aa4.52□□□□□ -1.69
HOXD3-202ENST00000410016 SPRR2BP35325 72 aa4.52□□□□□ -1.69
HOXD3-202ENST00000410016 SPRR2AP35326 72 aa4.52□□□□□ -1.69
HOXD3-202ENST00000410016 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
HOXD3-202ENST00000410016 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
HOXD3-202ENST00000410016 NEBP20929 6669 aa4.39□□□□□ -1.71
HOXD3-202ENST00000410016 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
HOXD3-202ENST00000410016 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
HOXD3-202ENST00000410016 SPRR2DP22532 72 aa4.32□□□□□ -1.72
HOXD3-202ENST00000410016 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
HOXD3-202ENST00000410016 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
HOXD3-202ENST00000410016 PRM1P04553 51 aa4.17□□□□□ -1.74
HOXD3-202ENST00000410016 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
HOXD3-202ENST00000410016 MT3P25713 68 aa4.16□□□□□ -1.74
HOXD3-202ENST00000410016 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
HOXD3-202ENST00000410016 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
HOXD3-202ENST00000410016 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
HOXD3-202ENST00000410016 MT4P47944 62 aa3.81□□□□□ -1.8
HOXD3-202ENST00000410016 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
HOXD3-202ENST00000410016 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
HOXD3-202ENST00000410016 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
HOXD3-202ENST00000410016 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
HOXD3-202ENST00000410016 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
HOXD3-202ENST00000410016 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
HOXD3-202ENST00000410016 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
HOXD3-202ENST00000410016 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
HOXD3-202ENST00000410016 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
HOXD3-202ENST00000410016 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
HOXD3-202ENST00000410016 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
HOXD3-202ENST00000410016 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
HOXD3-202ENST00000410016 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
HOXD3-202ENST00000410016 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
HOXD3-202ENST00000410016 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
HOXD3-202ENST00000410016 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
HOXD3-202ENST00000410016 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
HOXD3-202ENST00000410016 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
HOXD3-202ENST00000410016 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
HOXD3-202ENST00000410016 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
HOXD3-202ENST00000410016 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
HOXD3-202ENST00000410016 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
HOXD3-202ENST00000410016 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
HOXD3-202ENST00000410016 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
HOXD3-202ENST00000410016 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
HOXD3-202ENST00000410016 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
HOXD3-202ENST00000410016 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
HOXD3-202ENST00000410016 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
HOXD3-202ENST00000410016 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
HOXD3-202ENST00000410016 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 96.4 ms