RNA–Protein interactions for RNA: ENST00000409892.5

RAB1A-204, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB1A, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-204ENST00000409892 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
RAB1A-204ENST00000409892 NEBP20929 6669 aa5.86□□□□□ -1.47
RAB1A-204ENST00000409892 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
RAB1A-204ENST00000409892 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
RAB1A-204ENST00000409892 LCE1AQ5T7P2 110 aa5.81□□□□□ -1.48
RAB1A-204ENST00000409892 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
RAB1A-204ENST00000409892 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
RAB1A-204ENST00000409892 LCE2BO14633 110 aa5.65□□□□□ -1.51
RAB1A-204ENST00000409892 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
RAB1A-204ENST00000409892 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
RAB1A-204ENST00000409892 PRM1P04553 51 aa5.57□□□□□ -1.52
RAB1A-204ENST00000409892 MT1LQ93083 61 aa5.54□□□□□ -1.52
RAB1A-204ENST00000409892 MT1EP04732 61 aa5.48□□□□□ -1.53
RAB1A-204ENST00000409892 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.53
RAB1A-204ENST00000409892 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
RAB1A-204ENST00000409892 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
RAB1A-204ENST00000409892 LCE1EQ5T753 118 aa5.43□□□□□ -1.54
RAB1A-204ENST00000409892 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
RAB1A-204ENST00000409892 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.55
RAB1A-204ENST00000409892 MT1AP04731 61 aa5.37□□□□□ -1.55
RAB1A-204ENST00000409892 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
RAB1A-204ENST00000409892 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
RAB1A-204ENST00000409892 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
RAB1A-204ENST00000409892 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
RAB1A-204ENST00000409892 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
RAB1A-204ENST00000409892 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
RAB1A-204ENST00000409892 MT1GP13640 62 aa5.21□□□□□ -1.58
RAB1A-204ENST00000409892 KMT2DO14686 5537 aa5.2□□□□□ -1.58
RAB1A-204ENST00000409892 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
RAB1A-204ENST00000409892 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
RAB1A-204ENST00000409892 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
RAB1A-204ENST00000409892 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
RAB1A-204ENST00000409892 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
RAB1A-204ENST00000409892 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
RAB1A-204ENST00000409892 SPRR2EP22531 72 aa4.97□□□□□ -1.61
RAB1A-204ENST00000409892 SPRR2BP35325 72 aa4.97□□□□□ -1.61
RAB1A-204ENST00000409892 SPRR2AP35326 72 aa4.97□□□□□ -1.61
RAB1A-204ENST00000409892 MT1MQ8N339 61 aa4.92□□□□□ -1.62
RAB1A-204ENST00000409892 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
RAB1A-204ENST00000409892 LCE1FQ5T754 118 aa4.84□□□□□ -1.63
RAB1A-204ENST00000409892 SPRR2DP22532 72 aa4.83□□□□□ -1.64
RAB1A-204ENST00000409892 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
RAB1A-204ENST00000409892 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
RAB1A-204ENST00000409892 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
RAB1A-204ENST00000409892 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
RAB1A-204ENST00000409892 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
RAB1A-204ENST00000409892 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
RAB1A-204ENST00000409892 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
RAB1A-204ENST00000409892 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
RAB1A-204ENST00000409892 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
RAB1A-204ENST00000409892 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
RAB1A-204ENST00000409892 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
RAB1A-204ENST00000409892 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
RAB1A-204ENST00000409892 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
RAB1A-204ENST00000409892 MT4P47944 62 aa4.21□□□□□ -1.73
RAB1A-204ENST00000409892 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
RAB1A-204ENST00000409892 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
RAB1A-204ENST00000409892 MT3P25713 68 aa4.09□□□□□ -1.76
RAB1A-204ENST00000409892 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
RAB1A-204ENST00000409892 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
RAB1A-204ENST00000409892 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
RAB1A-204ENST00000409892 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
RAB1A-204ENST00000409892 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
RAB1A-204ENST00000409892 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
RAB1A-204ENST00000409892 KRTAP21-1Q3LI58 79 aa3.72□□□□□ -1.81
RAB1A-204ENST00000409892 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
RAB1A-204ENST00000409892 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
RAB1A-204ENST00000409892 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.82
RAB1A-204ENST00000409892 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
RAB1A-204ENST00000409892 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
RAB1A-204ENST00000409892 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
RAB1A-204ENST00000409892 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
RAB1A-204ENST00000409892 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
RAB1A-204ENST00000409892 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
RAB1A-204ENST00000409892 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
RAB1A-204ENST00000409892 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
RAB1A-204ENST00000409892 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 340 ms