RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
LIMS2-204ENST00000409286 MT1GP13640 62 aa6.57□□□□□ -1.36
LIMS2-204ENST00000409286 A0A0A0MQY5 61 aa6.56□□□□□ -1.36
LIMS2-204ENST00000409286 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
LIMS2-204ENST00000409286 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
LIMS2-204ENST00000409286 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
LIMS2-204ENST00000409286 MT1MQ8N339 61 aa6.49□□□□□ -1.37
LIMS2-204ENST00000409286 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
LIMS2-204ENST00000409286 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
LIMS2-204ENST00000409286 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
LIMS2-204ENST00000409286 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
LIMS2-204ENST00000409286 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
LIMS2-204ENST00000409286 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
LIMS2-204ENST00000409286 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
LIMS2-204ENST00000409286 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
LIMS2-204ENST00000409286 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
LIMS2-204ENST00000409286 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.42
LIMS2-204ENST00000409286 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
LIMS2-204ENST00000409286 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
LIMS2-204ENST00000409286 SPRR2EP22531 72 aa6.15□□□□□ -1.42
LIMS2-204ENST00000409286 SPRR2BP35325 72 aa6.15□□□□□ -1.42
LIMS2-204ENST00000409286 SPRR2AP35326 72 aa6.15□□□□□ -1.42
LIMS2-204ENST00000409286 INE1O15225 51 aa6.1□□□□□ -1.43
LIMS2-204ENST00000409286 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
LIMS2-204ENST00000409286 SPRR2DP22532 72 aa5.93□□□□□ -1.46
LIMS2-204ENST00000409286 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
LIMS2-204ENST00000409286 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
LIMS2-204ENST00000409286 MT1AP04731 61 aa5.81□□□□□ -1.48
LIMS2-204ENST00000409286 NEBP20929 6669 aa5.8□□□□□ -1.48
LIMS2-204ENST00000409286 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
LIMS2-204ENST00000409286 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
LIMS2-204ENST00000409286 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
LIMS2-204ENST00000409286 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
LIMS2-204ENST00000409286 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
LIMS2-204ENST00000409286 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.55
LIMS2-204ENST00000409286 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
LIMS2-204ENST00000409286 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
LIMS2-204ENST00000409286 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
LIMS2-204ENST00000409286 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
LIMS2-204ENST00000409286 MT3P25713 68 aa5.26□□□□□ -1.57
LIMS2-204ENST00000409286 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
LIMS2-204ENST00000409286 KRTAP20-1Q3LI63 56 aa5.2□□□□□ -1.58
LIMS2-204ENST00000409286 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
LIMS2-204ENST00000409286 MT4P47944 62 aa5.1□□□□□ -1.59
LIMS2-204ENST00000409286 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
LIMS2-204ENST00000409286 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
LIMS2-204ENST00000409286 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
LIMS2-204ENST00000409286 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
LIMS2-204ENST00000409286 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
LIMS2-204ENST00000409286 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
LIMS2-204ENST00000409286 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
LIMS2-204ENST00000409286 PRM1P04553 51 aa4.67□□□□□ -1.66
LIMS2-204ENST00000409286 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
LIMS2-204ENST00000409286 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
LIMS2-204ENST00000409286 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
LIMS2-204ENST00000409286 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
LIMS2-204ENST00000409286 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
LIMS2-204ENST00000409286 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
LIMS2-204ENST00000409286 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
LIMS2-204ENST00000409286 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
LIMS2-204ENST00000409286 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
LIMS2-204ENST00000409286 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
LIMS2-204ENST00000409286 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
LIMS2-204ENST00000409286 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
LIMS2-204ENST00000409286 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
LIMS2-204ENST00000409286 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
LIMS2-204ENST00000409286 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.81
LIMS2-204ENST00000409286 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
LIMS2-204ENST00000409286 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
LIMS2-204ENST00000409286 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
LIMS2-204ENST00000409286 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
LIMS2-204ENST00000409286 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
LIMS2-204ENST00000409286 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
LIMS2-204ENST00000409286 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
LIMS2-204ENST00000409286 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
LIMS2-204ENST00000409286 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
LIMS2-204ENST00000409286 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 103.7 ms