RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
SNORD88A-201ENST00000408314 K7ERS5 55 aa3.18□□□□□ -1.9
SNORD88A-201ENST00000408314 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
SNORD88A-201ENST00000408314 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
SNORD88A-201ENST00000408314 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
SNORD88A-201ENST00000408314 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
SNORD88A-201ENST00000408314 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
SNORD88A-201ENST00000408314 V9GYY9 64 aa3.14□□□□□ -1.91
SNORD88A-201ENST00000408314 MT4P47944 62 aa3.1□□□□□ -1.91
SNORD88A-201ENST00000408314 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
SNORD88A-201ENST00000408314 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
SNORD88A-201ENST00000408314 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
SNORD88A-201ENST00000408314 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
SNORD88A-201ENST00000408314 Q1T7F1 81 aa3.04□□□□□ -1.92
SNORD88A-201ENST00000408314 PSPHP1O15172 72 aa3.03□□□□□ -1.92
SNORD88A-201ENST00000408314 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
SNORD88A-201ENST00000408314 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
SNORD88A-201ENST00000408314 A6NED7 52 aa2.98□□□□□ -1.93
SNORD88A-201ENST00000408314 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
SNORD88A-201ENST00000408314 CDC42SE1Q9NRR8 79 aa2.96□□□□□ -1.94
SNORD88A-201ENST00000408314 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
SNORD88A-201ENST00000408314 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
SNORD88A-201ENST00000408314 KRTAP15-1Q3LI76 137 aa2.94□□□□□ -1.94
SNORD88A-201ENST00000408314 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
SNORD88A-201ENST00000408314 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
SNORD88A-201ENST00000408314 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
SNORD88A-201ENST00000408314 ROMO1P60602 79 aa2.88□□□□□ -1.95
SNORD88A-201ENST00000408314 RPS28P62857 69 aaKnown RBP2.88□□□□□ -1.95
SNORD88A-201ENST00000408314 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
SNORD88A-201ENST00000408314 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
SNORD88A-201ENST00000408314 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
SNORD88A-201ENST00000408314 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
SNORD88A-201ENST00000408314 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
SNORD88A-201ENST00000408314 MT1AP04731 61 aa2.77□□□□□ -1.97
SNORD88A-201ENST00000408314 PCP4P48539 62 aa2.74□□□□□ -1.97
SNORD88A-201ENST00000408314 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
SNORD88A-201ENST00000408314 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
SNORD88A-201ENST00000408314 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SNORD88A-201ENST00000408314 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
SNORD88A-201ENST00000408314 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
SNORD88A-201ENST00000408314 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
SNORD88A-201ENST00000408314 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
SNORD88A-201ENST00000408314 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
SNORD88A-201ENST00000408314 KRTAP5-8O75690 187 aa2.56□□□□□ -2
SNORD88A-201ENST00000408314 MT3P25713 68 aa2.56□□□□□ -2
SNORD88A-201ENST00000408314 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
SNORD88A-201ENST00000408314 BRK1Q8WUW1 75 aa2.51□□□□□ -2.01
SNORD88A-201ENST00000408314 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
SNORD88A-201ENST00000408314 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
SNORD88A-201ENST00000408314 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
SNORD88A-201ENST00000408314 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
SNORD88A-201ENST00000408314 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
SNORD88A-201ENST00000408314 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
SNORD88A-201ENST00000408314 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SNORD88A-201ENST00000408314 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
SNORD88A-201ENST00000408314 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
SNORD88A-201ENST00000408314 PRO0628Q9UI54 55 aa2.15□□□□□ -2.07
SNORD88A-201ENST00000408314 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
SNORD88A-201ENST00000408314 KTN1-AS1Q86SY8 53 aa2.08□□□□□ -2.08
SNORD88A-201ENST00000408314 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
SNORD88A-201ENST00000408314 SVIPQ8NHG7 77 aa2.02□□□□□ -2.09
SNORD88A-201ENST00000408314 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
SNORD88A-201ENST00000408314 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
SNORD88A-201ENST00000408314 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
SNORD88A-201ENST00000408314 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
SNORD88A-201ENST00000408314 KRTAP4-12Q9BQ66 201 aa1.95□□□□□ -2.1
SNORD88A-201ENST00000408314 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SNORD88A-201ENST00000408314 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
SNORD88A-201ENST00000408314 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
SNORD88A-201ENST00000408314 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
SNORD88A-201ENST00000408314 NDUFAF8A1L188 74 aa1.48□□□□□ -2.17
SNORD88A-201ENST00000408314 PRM1P04553 51 aa1.44□□□□□ -2.18
SNORD88A-201ENST00000408314 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
SNORD88A-201ENST00000408314 INE1O15225 51 aa1.25□□□□□ -2.21
SNORD88A-201ENST00000408314 A0A0A0MQY5 61 aa1.22□□□□□ -2.21
SNORD88A-201ENST00000408314 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
SNORD88A-201ENST00000408314 H3BS24 57 aa0.29□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms