RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
HERC3-203ENST00000407637 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
HERC3-203ENST00000407637 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
HERC3-203ENST00000407637 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
HERC3-203ENST00000407637 MT1LQ93083 61 aa4.16□□□□□ -1.74
HERC3-203ENST00000407637 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
HERC3-203ENST00000407637 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
HERC3-203ENST00000407637 MT1EP04732 61 aa4.08□□□□□ -1.76
HERC3-203ENST00000407637 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
HERC3-203ENST00000407637 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
HERC3-203ENST00000407637 MT1GP13640 62 aa3.99□□□□□ -1.77
HERC3-203ENST00000407637 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
HERC3-203ENST00000407637 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
HERC3-203ENST00000407637 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
HERC3-203ENST00000407637 PRM1P04553 51 aa3.86□□□□□ -1.79
HERC3-203ENST00000407637 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
HERC3-203ENST00000407637 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.79
HERC3-203ENST00000407637 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
HERC3-203ENST00000407637 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
HERC3-203ENST00000407637 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
HERC3-203ENST00000407637 MT1MQ8N339 61 aa3.77□□□□□ -1.81
HERC3-203ENST00000407637 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
HERC3-203ENST00000407637 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
HERC3-203ENST00000407637 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
HERC3-203ENST00000407637 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
HERC3-203ENST00000407637 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
HERC3-203ENST00000407637 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
HERC3-203ENST00000407637 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.81
HERC3-203ENST00000407637 MT1AP04731 61 aa3.71□□□□□ -1.82
HERC3-203ENST00000407637 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
HERC3-203ENST00000407637 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
HERC3-203ENST00000407637 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
HERC3-203ENST00000407637 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
HERC3-203ENST00000407637 MT3P25713 68 aa3.65□□□□□ -1.82
HERC3-203ENST00000407637 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.82
HERC3-203ENST00000407637 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
HERC3-203ENST00000407637 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
HERC3-203ENST00000407637 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
HERC3-203ENST00000407637 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
HERC3-203ENST00000407637 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
HERC3-203ENST00000407637 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
HERC3-203ENST00000407637 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
HERC3-203ENST00000407637 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
HERC3-203ENST00000407637 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
HERC3-203ENST00000407637 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
HERC3-203ENST00000407637 NEBP20929 6669 aa3.22□□□□□ -1.89
HERC3-203ENST00000407637 SPRR2EP22531 72 aa3.22□□□□□ -1.89
HERC3-203ENST00000407637 SPRR2BP35325 72 aa3.22□□□□□ -1.89
HERC3-203ENST00000407637 SPRR2AP35326 72 aa3.22□□□□□ -1.89
HERC3-203ENST00000407637 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
HERC3-203ENST00000407637 SPRR2DP22532 72 aa3.08□□□□□ -1.92
HERC3-203ENST00000407637 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
HERC3-203ENST00000407637 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
HERC3-203ENST00000407637 MT4P47944 62 aa2.79□□□□□ -1.96
HERC3-203ENST00000407637 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
HERC3-203ENST00000407637 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
HERC3-203ENST00000407637 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
HERC3-203ENST00000407637 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
HERC3-203ENST00000407637 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
HERC3-203ENST00000407637 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
HERC3-203ENST00000407637 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
HERC3-203ENST00000407637 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
HERC3-203ENST00000407637 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
HERC3-203ENST00000407637 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
HERC3-203ENST00000407637 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
HERC3-203ENST00000407637 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
HERC3-203ENST00000407637 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
HERC3-203ENST00000407637 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
HERC3-203ENST00000407637 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
HERC3-203ENST00000407637 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
HERC3-203ENST00000407637 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
HERC3-203ENST00000407637 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
HERC3-203ENST00000407637 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
HERC3-203ENST00000407637 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
HERC3-203ENST00000407637 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
HERC3-203ENST00000407637 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
HERC3-203ENST00000407637 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms