RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
GGA1-206ENST00000406772 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
GGA1-206ENST00000406772 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
GGA1-206ENST00000406772 MT1EP04732 61 aa4.92□□□□□ -1.62
GGA1-206ENST00000406772 MT1GP13640 62 aa4.92□□□□□ -1.62
GGA1-206ENST00000406772 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
GGA1-206ENST00000406772 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
GGA1-206ENST00000406772 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
GGA1-206ENST00000406772 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
GGA1-206ENST00000406772 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
GGA1-206ENST00000406772 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
GGA1-206ENST00000406772 MT1MQ8N339 61 aa4.61□□□□□ -1.67
GGA1-206ENST00000406772 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
GGA1-206ENST00000406772 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
GGA1-206ENST00000406772 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
GGA1-206ENST00000406772 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
GGA1-206ENST00000406772 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
GGA1-206ENST00000406772 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
GGA1-206ENST00000406772 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
GGA1-206ENST00000406772 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.72
GGA1-206ENST00000406772 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
GGA1-206ENST00000406772 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
GGA1-206ENST00000406772 PRM1P04553 51 aa4.3□□□□□ -1.72
GGA1-206ENST00000406772 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
GGA1-206ENST00000406772 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
GGA1-206ENST00000406772 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
GGA1-206ENST00000406772 MT1AP04731 61 aa4.1□□□□□ -1.75
GGA1-206ENST00000406772 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
GGA1-206ENST00000406772 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
GGA1-206ENST00000406772 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
GGA1-206ENST00000406772 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
GGA1-206ENST00000406772 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
GGA1-206ENST00000406772 SPRR2EP22531 72 aa4□□□□□ -1.77
GGA1-206ENST00000406772 SPRR2BP35325 72 aa4□□□□□ -1.77
GGA1-206ENST00000406772 SPRR2AP35326 72 aa4□□□□□ -1.77
GGA1-206ENST00000406772 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
GGA1-206ENST00000406772 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
GGA1-206ENST00000406772 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
GGA1-206ENST00000406772 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
GGA1-206ENST00000406772 SPRR2DP22532 72 aa3.79□□□□□ -1.8
GGA1-206ENST00000406772 MT3P25713 68 aa3.74□□□□□ -1.81
GGA1-206ENST00000406772 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
GGA1-206ENST00000406772 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
GGA1-206ENST00000406772 MT4P47944 62 aa3.56□□□□□ -1.84
GGA1-206ENST00000406772 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
GGA1-206ENST00000406772 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
GGA1-206ENST00000406772 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
GGA1-206ENST00000406772 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
GGA1-206ENST00000406772 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
GGA1-206ENST00000406772 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
GGA1-206ENST00000406772 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
GGA1-206ENST00000406772 NEBP20929 6669 aa3.24□□□□□ -1.89
GGA1-206ENST00000406772 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
GGA1-206ENST00000406772 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
GGA1-206ENST00000406772 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
GGA1-206ENST00000406772 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
GGA1-206ENST00000406772 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
GGA1-206ENST00000406772 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
GGA1-206ENST00000406772 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
GGA1-206ENST00000406772 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
GGA1-206ENST00000406772 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
GGA1-206ENST00000406772 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
GGA1-206ENST00000406772 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
GGA1-206ENST00000406772 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
GGA1-206ENST00000406772 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
GGA1-206ENST00000406772 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
GGA1-206ENST00000406772 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
GGA1-206ENST00000406772 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
GGA1-206ENST00000406772 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
GGA1-206ENST00000406772 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
GGA1-206ENST00000406772 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
GGA1-206ENST00000406772 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
GGA1-206ENST00000406772 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
GGA1-206ENST00000406772 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
GGA1-206ENST00000406772 PHGR1C9JFL3 82 aa1.96□□□□□ -2.09
GGA1-206ENST00000406772 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
GGA1-206ENST00000406772 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 169.7 ms