RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
PSEN1-205ENST00000406768 LCE2BO14633 110 aa2.91□□□□□ -1.94
PSEN1-205ENST00000406768 LCE3BQ5TA77 95 aa2.91□□□□□ -1.94
PSEN1-205ENST00000406768 USH2AO75445 5202 aa2.9□□□□□ -1.94
PSEN1-205ENST00000406768 MT1GP13640 62 aa2.9□□□□□ -1.95
PSEN1-205ENST00000406768 PRM1P04553 51 aa2.88□□□□□ -1.95
PSEN1-205ENST00000406768 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
PSEN1-205ENST00000406768 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
PSEN1-205ENST00000406768 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
PSEN1-205ENST00000406768 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
PSEN1-205ENST00000406768 KMT2DO14686 5537 aa2.86□□□□□ -1.95
PSEN1-205ENST00000406768 MT1LQ93083 61 aa2.86□□□□□ -1.95
PSEN1-205ENST00000406768 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
PSEN1-205ENST00000406768 FCGBPQ9Y6R7 5405 aaPredicted RBP2.84□□□□□ -1.95
PSEN1-205ENST00000406768 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
PSEN1-205ENST00000406768 MT1EP04732 61 aa2.78□□□□□ -1.97
PSEN1-205ENST00000406768 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
PSEN1-205ENST00000406768 NEBP20929 6669 aa2.77□□□□□ -1.97
PSEN1-205ENST00000406768 KRTAP19-7Q3SYF9 63 aa2.77□□□□□ -1.97
PSEN1-205ENST00000406768 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
PSEN1-205ENST00000406768 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
PSEN1-205ENST00000406768 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
PSEN1-205ENST00000406768 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
PSEN1-205ENST00000406768 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
PSEN1-205ENST00000406768 SPRR2EP22531 72 aa2.69□□□□□ -1.98
PSEN1-205ENST00000406768 SPRR2BP35325 72 aa2.69□□□□□ -1.98
PSEN1-205ENST00000406768 SPRR2AP35326 72 aa2.69□□□□□ -1.98
PSEN1-205ENST00000406768 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
PSEN1-205ENST00000406768 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
PSEN1-205ENST00000406768 MT1MQ8N339 61 aa2.62□□□□□ -1.99
PSEN1-205ENST00000406768 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
PSEN1-205ENST00000406768 SPRR2DP22532 72 aa2.6□□□□□ -1.99
PSEN1-205ENST00000406768 MT1AP04731 61 aa2.59□□□□□ -1.99
PSEN1-205ENST00000406768 LCE1AQ5T7P2 110 aa2.59□□□□□ -1.99
PSEN1-205ENST00000406768 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
PSEN1-205ENST00000406768 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
PSEN1-205ENST00000406768 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
PSEN1-205ENST00000406768 MDN1Q9NU22 5596 aa2.54□□□□□ -2
PSEN1-205ENST00000406768 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
PSEN1-205ENST00000406768 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
PSEN1-205ENST00000406768 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
PSEN1-205ENST00000406768 LCE5AQ5TCM9 118 aa2.42□□□□□ -2.02
PSEN1-205ENST00000406768 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
PSEN1-205ENST00000406768 MT3P25713 68 aa2.38□□□□□ -2.03
PSEN1-205ENST00000406768 MT4P47944 62 aa2.37□□□□□ -2.03
PSEN1-205ENST00000406768 LCE1DQ5T752 114 aa2.32□□□□□ -2.04
PSEN1-205ENST00000406768 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
PSEN1-205ENST00000406768 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
PSEN1-205ENST00000406768 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
PSEN1-205ENST00000406768 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
PSEN1-205ENST00000406768 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
PSEN1-205ENST00000406768 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
PSEN1-205ENST00000406768 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
PSEN1-205ENST00000406768 KRTAP4-6Q9BYQ5 205 aa2.11□□□□□ -2.07
PSEN1-205ENST00000406768 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
PSEN1-205ENST00000406768 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
PSEN1-205ENST00000406768 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
PSEN1-205ENST00000406768 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.09
PSEN1-205ENST00000406768 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
PSEN1-205ENST00000406768 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
PSEN1-205ENST00000406768 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
PSEN1-205ENST00000406768 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
PSEN1-205ENST00000406768 KRTAP9-9Q9BYP9 154 aa1.89□□□□□ -2.11
PSEN1-205ENST00000406768 KRTAP4-12Q9BQ66 201 aa1.83□□□□□ -2.12
PSEN1-205ENST00000406768 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
PSEN1-205ENST00000406768 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
PSEN1-205ENST00000406768 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
PSEN1-205ENST00000406768 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
PSEN1-205ENST00000406768 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
PSEN1-205ENST00000406768 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
PSEN1-205ENST00000406768 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
PSEN1-205ENST00000406768 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
PSEN1-205ENST00000406768 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
PSEN1-205ENST00000406768 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
PSEN1-205ENST00000406768 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
PSEN1-205ENST00000406768 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
PSEN1-205ENST00000406768 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 216.1 ms