RNA–Protein interactions for RNA: ENST00000406028.1

CLDN5-202, Transcript of claudin 5, humanhuman

TSL 2 BASIC

Gene CLDN5, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5-202ENST00000406028 MT1EP04732 61 aa6.11□□□□□ -1.43
CLDN5-202ENST00000406028 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
CLDN5-202ENST00000406028 MT1LQ93083 61 aa6.04□□□□□ -1.44
CLDN5-202ENST00000406028 MUC12Q9UKN1 5478 aa6.01□□□□□ -1.45
CLDN5-202ENST00000406028 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
CLDN5-202ENST00000406028 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
CLDN5-202ENST00000406028 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
CLDN5-202ENST00000406028 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
CLDN5-202ENST00000406028 MT1GP13640 62 aa5.82□□□□□ -1.48
CLDN5-202ENST00000406028 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
CLDN5-202ENST00000406028 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
CLDN5-202ENST00000406028 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
CLDN5-202ENST00000406028 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
CLDN5-202ENST00000406028 MT1MQ8N339 61 aa5.75□□□□□ -1.49
CLDN5-202ENST00000406028 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CLDN5-202ENST00000406028 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
CLDN5-202ENST00000406028 SYNE2Q8WXH0 6885 aaKnown RBP5.66□□□□□ -1.5
CLDN5-202ENST00000406028 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
CLDN5-202ENST00000406028 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
CLDN5-202ENST00000406028 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
CLDN5-202ENST00000406028 SPRR2EP22531 72 aa5.45□□□□□ -1.54
CLDN5-202ENST00000406028 SPRR2BP35325 72 aa5.45□□□□□ -1.54
CLDN5-202ENST00000406028 SPRR2AP35326 72 aa5.45□□□□□ -1.54
CLDN5-202ENST00000406028 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
CLDN5-202ENST00000406028 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
CLDN5-202ENST00000406028 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
CLDN5-202ENST00000406028 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
CLDN5-202ENST00000406028 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
CLDN5-202ENST00000406028 SPRR2DP22532 72 aa5.25□□□□□ -1.57
CLDN5-202ENST00000406028 MT1AP04731 61 aa5.24□□□□□ -1.57
CLDN5-202ENST00000406028 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
CLDN5-202ENST00000406028 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
CLDN5-202ENST00000406028 PRM1P04553 51 aa5.15□□□□□ -1.59
CLDN5-202ENST00000406028 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
CLDN5-202ENST00000406028 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
CLDN5-202ENST00000406028 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
CLDN5-202ENST00000406028 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
CLDN5-202ENST00000406028 NEBP20929 6669 aa4.95□□□□□ -1.62
CLDN5-202ENST00000406028 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
CLDN5-202ENST00000406028 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
CLDN5-202ENST00000406028 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CLDN5-202ENST00000406028 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
CLDN5-202ENST00000406028 MT3P25713 68 aa4.67□□□□□ -1.66
CLDN5-202ENST00000406028 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
CLDN5-202ENST00000406028 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
CLDN5-202ENST00000406028 MT4P47944 62 aa4.55□□□□□ -1.68
CLDN5-202ENST00000406028 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
CLDN5-202ENST00000406028 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
CLDN5-202ENST00000406028 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
CLDN5-202ENST00000406028 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
CLDN5-202ENST00000406028 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
CLDN5-202ENST00000406028 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
CLDN5-202ENST00000406028 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
CLDN5-202ENST00000406028 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
CLDN5-202ENST00000406028 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
CLDN5-202ENST00000406028 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
CLDN5-202ENST00000406028 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
CLDN5-202ENST00000406028 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
CLDN5-202ENST00000406028 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
CLDN5-202ENST00000406028 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
CLDN5-202ENST00000406028 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
CLDN5-202ENST00000406028 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
CLDN5-202ENST00000406028 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CLDN5-202ENST00000406028 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
CLDN5-202ENST00000406028 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
CLDN5-202ENST00000406028 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.85
CLDN5-202ENST00000406028 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
CLDN5-202ENST00000406028 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
CLDN5-202ENST00000406028 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
CLDN5-202ENST00000406028 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
CLDN5-202ENST00000406028 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CLDN5-202ENST00000406028 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
CLDN5-202ENST00000406028 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CLDN5-202ENST00000406028 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CLDN5-202ENST00000406028 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
CLDN5-202ENST00000406028 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
CLDN5-202ENST00000406028 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms