RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
CEACAM1-206ENST00000403136 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
CEACAM1-206ENST00000403136 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
CEACAM1-206ENST00000403136 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
CEACAM1-206ENST00000403136 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
CEACAM1-206ENST00000403136 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
CEACAM1-206ENST00000403136 MT1GP13640 62 aa4.59□□□□□ -1.67
CEACAM1-206ENST00000403136 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
CEACAM1-206ENST00000403136 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
CEACAM1-206ENST00000403136 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
CEACAM1-206ENST00000403136 MT1MQ8N339 61 aa4.53□□□□□ -1.68
CEACAM1-206ENST00000403136 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
CEACAM1-206ENST00000403136 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
CEACAM1-206ENST00000403136 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
CEACAM1-206ENST00000403136 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
CEACAM1-206ENST00000403136 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
CEACAM1-206ENST00000403136 SPRR2EP22531 72 aa4.44□□□□□ -1.7
CEACAM1-206ENST00000403136 SPRR2BP35325 72 aa4.44□□□□□ -1.7
CEACAM1-206ENST00000403136 SPRR2AP35326 72 aa4.44□□□□□ -1.7
CEACAM1-206ENST00000403136 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
CEACAM1-206ENST00000403136 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
CEACAM1-206ENST00000403136 SPRR2DP22532 72 aa4.27□□□□□ -1.73
CEACAM1-206ENST00000403136 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
CEACAM1-206ENST00000403136 NEBP20929 6669 aa4.21□□□□□ -1.73
CEACAM1-206ENST00000403136 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
CEACAM1-206ENST00000403136 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
CEACAM1-206ENST00000403136 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
CEACAM1-206ENST00000403136 H3BS24 57 aa4.15□□□□□ -1.74
CEACAM1-206ENST00000403136 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
CEACAM1-206ENST00000403136 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
CEACAM1-206ENST00000403136 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
CEACAM1-206ENST00000403136 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
CEACAM1-206ENST00000403136 MT1AP04731 61 aa4.01□□□□□ -1.77
CEACAM1-206ENST00000403136 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
CEACAM1-206ENST00000403136 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
CEACAM1-206ENST00000403136 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
CEACAM1-206ENST00000403136 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
CEACAM1-206ENST00000403136 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
CEACAM1-206ENST00000403136 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
CEACAM1-206ENST00000403136 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
CEACAM1-206ENST00000403136 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
CEACAM1-206ENST00000403136 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
CEACAM1-206ENST00000403136 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
CEACAM1-206ENST00000403136 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
CEACAM1-206ENST00000403136 MT4P47944 62 aa3.72□□□□□ -1.81
CEACAM1-206ENST00000403136 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.81
CEACAM1-206ENST00000403136 INE1O15225 51 aa3.71□□□□□ -1.82
CEACAM1-206ENST00000403136 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
CEACAM1-206ENST00000403136 MT3P25713 68 aa3.65□□□□□ -1.83
CEACAM1-206ENST00000403136 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
CEACAM1-206ENST00000403136 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
CEACAM1-206ENST00000403136 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
CEACAM1-206ENST00000403136 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
CEACAM1-206ENST00000403136 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
CEACAM1-206ENST00000403136 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
CEACAM1-206ENST00000403136 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
CEACAM1-206ENST00000403136 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
CEACAM1-206ENST00000403136 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
CEACAM1-206ENST00000403136 LCE1EQ5T753 118 aa3.15□□□□□ -1.9
CEACAM1-206ENST00000403136 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
CEACAM1-206ENST00000403136 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
CEACAM1-206ENST00000403136 PRM1P04553 51 aa3.01□□□□□ -1.93
CEACAM1-206ENST00000403136 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
CEACAM1-206ENST00000403136 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
CEACAM1-206ENST00000403136 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
CEACAM1-206ENST00000403136 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
CEACAM1-206ENST00000403136 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
CEACAM1-206ENST00000403136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
CEACAM1-206ENST00000403136 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
CEACAM1-206ENST00000403136 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
CEACAM1-206ENST00000403136 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
CEACAM1-206ENST00000403136 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
CEACAM1-206ENST00000403136 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
CEACAM1-206ENST00000403136 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CEACAM1-206ENST00000403136 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CEACAM1-206ENST00000403136 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
CEACAM1-206ENST00000403136 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CEACAM1-206ENST00000403136 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 118.9 ms