RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
DNMT3A-205ENST00000402667 INE1O15225 51 aa5.83□□□□□ -1.48
DNMT3A-205ENST00000402667 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
DNMT3A-205ENST00000402667 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
DNMT3A-205ENST00000402667 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
DNMT3A-205ENST00000402667 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
DNMT3A-205ENST00000402667 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
DNMT3A-205ENST00000402667 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
DNMT3A-205ENST00000402667 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
DNMT3A-205ENST00000402667 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
DNMT3A-205ENST00000402667 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
DNMT3A-205ENST00000402667 MT1GP13640 62 aa5.6□□□□□ -1.51
DNMT3A-205ENST00000402667 MT1MQ8N339 61 aa5.59□□□□□ -1.51
DNMT3A-205ENST00000402667 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
DNMT3A-205ENST00000402667 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
DNMT3A-205ENST00000402667 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
DNMT3A-205ENST00000402667 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
DNMT3A-205ENST00000402667 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
DNMT3A-205ENST00000402667 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
DNMT3A-205ENST00000402667 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
DNMT3A-205ENST00000402667 KRTAP5-9P26371 169 aa5.27□□□□□ -1.57
DNMT3A-205ENST00000402667 NEBP20929 6669 aa5.19□□□□□ -1.58
DNMT3A-205ENST00000402667 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
DNMT3A-205ENST00000402667 SPRR2EP22531 72 aa5.09□□□□□ -1.59
DNMT3A-205ENST00000402667 SPRR2BP35325 72 aa5.09□□□□□ -1.59
DNMT3A-205ENST00000402667 SPRR2AP35326 72 aa5.09□□□□□ -1.59
DNMT3A-205ENST00000402667 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
DNMT3A-205ENST00000402667 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
DNMT3A-205ENST00000402667 MT1AP04731 61 aa5□□□□□ -1.61
DNMT3A-205ENST00000402667 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
DNMT3A-205ENST00000402667 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
DNMT3A-205ENST00000402667 SPRR2DP22532 72 aa4.91□□□□□ -1.62
DNMT3A-205ENST00000402667 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
DNMT3A-205ENST00000402667 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
DNMT3A-205ENST00000402667 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
DNMT3A-205ENST00000402667 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
DNMT3A-205ENST00000402667 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
DNMT3A-205ENST00000402667 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
DNMT3A-205ENST00000402667 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
DNMT3A-205ENST00000402667 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
DNMT3A-205ENST00000402667 MT3P25713 68 aa4.5□□□□□ -1.69
DNMT3A-205ENST00000402667 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
DNMT3A-205ENST00000402667 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
DNMT3A-205ENST00000402667 PRM1P04553 51 aa4.35□□□□□ -1.71
DNMT3A-205ENST00000402667 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
DNMT3A-205ENST00000402667 MT4P47944 62 aa4.32□□□□□ -1.72
DNMT3A-205ENST00000402667 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
DNMT3A-205ENST00000402667 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
DNMT3A-205ENST00000402667 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
DNMT3A-205ENST00000402667 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
DNMT3A-205ENST00000402667 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
DNMT3A-205ENST00000402667 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
DNMT3A-205ENST00000402667 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
DNMT3A-205ENST00000402667 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
DNMT3A-205ENST00000402667 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
DNMT3A-205ENST00000402667 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
DNMT3A-205ENST00000402667 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
DNMT3A-205ENST00000402667 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
DNMT3A-205ENST00000402667 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
DNMT3A-205ENST00000402667 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
DNMT3A-205ENST00000402667 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
DNMT3A-205ENST00000402667 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
DNMT3A-205ENST00000402667 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
DNMT3A-205ENST00000402667 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
DNMT3A-205ENST00000402667 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
DNMT3A-205ENST00000402667 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
DNMT3A-205ENST00000402667 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
DNMT3A-205ENST00000402667 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
DNMT3A-205ENST00000402667 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
DNMT3A-205ENST00000402667 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
DNMT3A-205ENST00000402667 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
DNMT3A-205ENST00000402667 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
DNMT3A-205ENST00000402667 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
DNMT3A-205ENST00000402667 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.97
DNMT3A-205ENST00000402667 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
DNMT3A-205ENST00000402667 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
DNMT3A-205ENST00000402667 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 63 ms