RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SPRR2DP22532 72 aa2.24□□□□□ -2.05
HMGB1P20-201ENST00000402555 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
HMGB1P20-201ENST00000402555 SERP1Q9Y6X1 66 aa2.23□□□□□ -2.05
HMGB1P20-201ENST00000402555 SEC61GP60059 68 aa2.22□□□□□ -2.05
HMGB1P20-201ENST00000402555 A0A1B0GU33 70 aa2.21□□□□□ -2.06
HMGB1P20-201ENST00000402555 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
HMGB1P20-201ENST00000402555 ANAPC13Q9BS18 74 aa2.2□□□□□ -2.06
HMGB1P20-201ENST00000402555 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
HMGB1P20-201ENST00000402555 CCDC179H3BU77 68 aa2.18□□□□□ -2.06
HMGB1P20-201ENST00000402555 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
HMGB1P20-201ENST00000402555 A0A1B0GU69 56 aa2.17□□□□□ -2.06
HMGB1P20-201ENST00000402555 A8MU10 97 aa2.17□□□□□ -2.06
HMGB1P20-201ENST00000402555 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
HMGB1P20-201ENST00000402555 KRTAP4-3Q9BYR4 195 aa2.17□□□□□ -2.06
HMGB1P20-201ENST00000402555 MT1EP04732 61 aa2.15□□□□□ -2.07
HMGB1P20-201ENST00000402555 SMIM26A0A096LP01 95 aa2.13□□□□□ -2.07
HMGB1P20-201ENST00000402555 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
HMGB1P20-201ENST00000402555 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
HMGB1P20-201ENST00000402555 ATP5EP56381 51 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P20-201ENST00000402555 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
HMGB1P20-201ENST00000402555 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
HMGB1P20-201ENST00000402555 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
HMGB1P20-201ENST00000402555 PRR15LQ9BU68 103 aa2.08□□□□□ -2.08
HMGB1P20-201ENST00000402555 LINC01558Q9Y6Z2 57 aa2.08□□□□□ -2.08
HMGB1P20-201ENST00000402555 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
HMGB1P20-201ENST00000402555 TNP1P09430 55 aa2.06□□□□□ -2.08
HMGB1P20-201ENST00000402555 MT1GP13640 62 aa2.06□□□□□ -2.08
HMGB1P20-201ENST00000402555 MT1LQ93083 61 aa2.06□□□□□ -2.08
HMGB1P20-201ENST00000402555 TMEM258P61165 79 aa2.05□□□□□ -2.08
HMGB1P20-201ENST00000402555 MT1MQ8N339 61 aa2.05□□□□□ -2.08
HMGB1P20-201ENST00000402555 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
HMGB1P20-201ENST00000402555 PP632Q6XCG6 107 aa2.03□□□□□ -2.08
HMGB1P20-201ENST00000402555 UQCR11O14957 56 aa2.02□□□□□ -2.09
HMGB1P20-201ENST00000402555 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
HMGB1P20-201ENST00000402555 MIR22HGQ0VDD5 57 aa1.99□□□□□ -2.09
HMGB1P20-201ENST00000402555 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
HMGB1P20-201ENST00000402555 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
HMGB1P20-201ENST00000402555 PSPHP1O15172 72 aa1.97□□□□□ -2.09
HMGB1P20-201ENST00000402555 MT4P47944 62 aa1.97□□□□□ -2.09
HMGB1P20-201ENST00000402555 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P20-201ENST00000402555 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
HMGB1P20-201ENST00000402555 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
HMGB1P20-201ENST00000402555 Q1T7F1 81 aa1.93□□□□□ -2.1
HMGB1P20-201ENST00000402555 V9GYY9 64 aa1.93□□□□□ -2.1
HMGB1P20-201ENST00000402555 K7ERS5 55 aa1.92□□□□□ -2.1
HMGB1P20-201ENST00000402555 A6NED7 52 aa1.89□□□□□ -2.11
HMGB1P20-201ENST00000402555 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
HMGB1P20-201ENST00000402555 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
HMGB1P20-201ENST00000402555 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
HMGB1P20-201ENST00000402555 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.11
HMGB1P20-201ENST00000402555 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
HMGB1P20-201ENST00000402555 ROMO1P60602 79 aa1.82□□□□□ -2.12
HMGB1P20-201ENST00000402555 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
HMGB1P20-201ENST00000402555 RPS28P62857 69 aaKnown RBP1.81□□□□□ -2.12
HMGB1P20-201ENST00000402555 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
HMGB1P20-201ENST00000402555 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
HMGB1P20-201ENST00000402555 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
HMGB1P20-201ENST00000402555 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
HMGB1P20-201ENST00000402555 MT1AP04731 61 aa1.74□□□□□ -2.13
HMGB1P20-201ENST00000402555 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
HMGB1P20-201ENST00000402555 PRO0628Q9UI54 55 aa1.69□□□□□ -2.14
HMGB1P20-201ENST00000402555 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
HMGB1P20-201ENST00000402555 BRK1Q8WUW1 75 aa1.63□□□□□ -2.15
HMGB1P20-201ENST00000402555 LCE3DQ9BYE3 92 aa1.63□□□□□ -2.15
HMGB1P20-201ENST00000402555 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
HMGB1P20-201ENST00000402555 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P20-201ENST00000402555 LUZP6Q538Z0 58 aa1.6□□□□□ -2.15
HMGB1P20-201ENST00000402555 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
HMGB1P20-201ENST00000402555 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
HMGB1P20-201ENST00000402555 PMAIP1Q13794 54 aa1.51□□□□□ -2.17
HMGB1P20-201ENST00000402555 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
HMGB1P20-201ENST00000402555 KTN1-AS1Q86SY8 53 aa1.32□□□□□ -2.2
HMGB1P20-201ENST00000402555 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
HMGB1P20-201ENST00000402555 INE1O15225 51 aa1.02□□□□□ -2.25
HMGB1P20-201ENST00000402555 PRM1P04553 51 aa0.95□□□□□ -2.26
HMGB1P20-201ENST00000402555 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
HMGB1P20-201ENST00000402555 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 68.6 ms