RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 R4GN34 69 aa3.08□□□□□ -1.92
CSNK2A1-204ENST00000400227 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
CSNK2A1-204ENST00000400227 HMCN2Q8NDA2 5059 aa3.02□□□□□ -1.93
CSNK2A1-204ENST00000400227 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
CSNK2A1-204ENST00000400227 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
CSNK2A1-204ENST00000400227 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
CSNK2A1-204ENST00000400227 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
CSNK2A1-204ENST00000400227 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
CSNK2A1-204ENST00000400227 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
CSNK2A1-204ENST00000400227 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
CSNK2A1-204ENST00000400227 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CSNK2A1-204ENST00000400227 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
CSNK2A1-204ENST00000400227 SPRR2GQ9BYE4 73 aa2.86□□□□□ -1.95
CSNK2A1-204ENST00000400227 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
CSNK2A1-204ENST00000400227 MT1HP80294 61 aa2.84□□□□□ -1.96
CSNK2A1-204ENST00000400227 LUZP6Q538Z0 58 aa2.84□□□□□ -1.96
CSNK2A1-204ENST00000400227 TNP1P09430 55 aa2.83□□□□□ -1.96
CSNK2A1-204ENST00000400227 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
CSNK2A1-204ENST00000400227 MT2AP02795 61 aa2.8□□□□□ -1.96
CSNK2A1-204ENST00000400227 MT1FP04733 61 aa2.8□□□□□ -1.96
CSNK2A1-204ENST00000400227 M0R2T5 61 aa2.78□□□□□ -1.96
CSNK2A1-204ENST00000400227 KRTAP19-8Q3LI54 63 aa2.77□□□□□ -1.97
CSNK2A1-204ENST00000400227 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
CSNK2A1-204ENST00000400227 MT1BP07438 61 aa2.71□□□□□ -1.97
CSNK2A1-204ENST00000400227 MT1XP80297 61 aa2.68□□□□□ -1.98
CSNK2A1-204ENST00000400227 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.98
CSNK2A1-204ENST00000400227 KRTAP12-3P60328 96 aa2.57□□□□□ -2
CSNK2A1-204ENST00000400227 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
CSNK2A1-204ENST00000400227 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
CSNK2A1-204ENST00000400227 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
CSNK2A1-204ENST00000400227 NEBP20929 6669 aa2.5□□□□□ -2.01
CSNK2A1-204ENST00000400227 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
CSNK2A1-204ENST00000400227 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
CSNK2A1-204ENST00000400227 USH2AO75445 5202 aa2.46□□□□□ -2.02
CSNK2A1-204ENST00000400227 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
CSNK2A1-204ENST00000400227 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
CSNK2A1-204ENST00000400227 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
CSNK2A1-204ENST00000400227 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
CSNK2A1-204ENST00000400227 KMT2DO14686 5537 aa2.37□□□□□ -2.03
CSNK2A1-204ENST00000400227 INE1O15225 51 aa2.35□□□□□ -2.03
CSNK2A1-204ENST00000400227 MT1EP04732 61 aa2.33□□□□□ -2.04
CSNK2A1-204ENST00000400227 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
CSNK2A1-204ENST00000400227 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
CSNK2A1-204ENST00000400227 KRTAP19-6Q3LI70 58 aa2.32□□□□□ -2.04
CSNK2A1-204ENST00000400227 MT1LQ93083 61 aa2.32□□□□□ -2.04
CSNK2A1-204ENST00000400227 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
CSNK2A1-204ENST00000400227 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
CSNK2A1-204ENST00000400227 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
CSNK2A1-204ENST00000400227 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
CSNK2A1-204ENST00000400227 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
CSNK2A1-204ENST00000400227 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
CSNK2A1-204ENST00000400227 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
CSNK2A1-204ENST00000400227 MT1MQ8N339 61 aa2.17□□□□□ -2.06
CSNK2A1-204ENST00000400227 MT1GP13640 62 aa2.16□□□□□ -2.06
CSNK2A1-204ENST00000400227 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
CSNK2A1-204ENST00000400227 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
CSNK2A1-204ENST00000400227 SPRR2FQ96RM1 72 aa2.07□□□□□ -2.08
CSNK2A1-204ENST00000400227 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CSNK2A1-204ENST00000400227 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
CSNK2A1-204ENST00000400227 MT1AP04731 61 aa1.95□□□□□ -2.1
CSNK2A1-204ENST00000400227 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
CSNK2A1-204ENST00000400227 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
CSNK2A1-204ENST00000400227 SPRR2EP22531 72 aa1.93□□□□□ -2.1
CSNK2A1-204ENST00000400227 SPRR2BP35325 72 aa1.93□□□□□ -2.1
CSNK2A1-204ENST00000400227 SPRR2AP35326 72 aa1.93□□□□□ -2.1
CSNK2A1-204ENST00000400227 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
CSNK2A1-204ENST00000400227 SPRR2DP22532 72 aa1.87□□□□□ -2.11
CSNK2A1-204ENST00000400227 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
CSNK2A1-204ENST00000400227 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.11
CSNK2A1-204ENST00000400227 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
CSNK2A1-204ENST00000400227 PRM1P04553 51 aa1.74□□□□□ -2.13
CSNK2A1-204ENST00000400227 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
CSNK2A1-204ENST00000400227 MT4P47944 62 aa1.63□□□□□ -2.15
CSNK2A1-204ENST00000400227 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
CSNK2A1-204ENST00000400227 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CSNK2A1-204ENST00000400227 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
CSNK2A1-204ENST00000400227 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms