RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
NPRL3-201ENST00000399953 FCGBPQ9Y6R7 5405 aaPredicted RBP5.3□□□□□ -1.56
NPRL3-201ENST00000399953 MT1EP04732 61 aa5.24□□□□□ -1.57
NPRL3-201ENST00000399953 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
NPRL3-201ENST00000399953 MT1GP13640 62 aa5.09□□□□□ -1.6
NPRL3-201ENST00000399953 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
NPRL3-201ENST00000399953 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
NPRL3-201ENST00000399953 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
NPRL3-201ENST00000399953 MACF1Q9UPN3 7388 aaKnown RBP5.01□□□□□ -1.61
NPRL3-201ENST00000399953 PRM1P04553 51 aa4.99□□□□□ -1.61
NPRL3-201ENST00000399953 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
NPRL3-201ENST00000399953 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
NPRL3-201ENST00000399953 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
NPRL3-201ENST00000399953 KRTAP9-6A0A140TA67 174 aa4.93□□□□□ -1.62
NPRL3-201ENST00000399953 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
NPRL3-201ENST00000399953 MT1AP04731 61 aa4.92□□□□□ -1.62
NPRL3-201ENST00000399953 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
NPRL3-201ENST00000399953 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
NPRL3-201ENST00000399953 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
NPRL3-201ENST00000399953 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
NPRL3-201ENST00000399953 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
NPRL3-201ENST00000399953 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
NPRL3-201ENST00000399953 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
NPRL3-201ENST00000399953 MT1MQ8N339 61 aa4.85□□□□□ -1.63
NPRL3-201ENST00000399953 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
NPRL3-201ENST00000399953 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
NPRL3-201ENST00000399953 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
NPRL3-201ENST00000399953 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
NPRL3-201ENST00000399953 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
NPRL3-201ENST00000399953 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
NPRL3-201ENST00000399953 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
NPRL3-201ENST00000399953 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
NPRL3-201ENST00000399953 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
NPRL3-201ENST00000399953 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
NPRL3-201ENST00000399953 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
NPRL3-201ENST00000399953 SPRR2EP22531 72 aa4.26□□□□□ -1.73
NPRL3-201ENST00000399953 SPRR2BP35325 72 aa4.26□□□□□ -1.73
NPRL3-201ENST00000399953 SPRR2AP35326 72 aa4.26□□□□□ -1.73
NPRL3-201ENST00000399953 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
NPRL3-201ENST00000399953 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
NPRL3-201ENST00000399953 SPRR2DP22532 72 aa4.04□□□□□ -1.76
NPRL3-201ENST00000399953 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
NPRL3-201ENST00000399953 MT3P25713 68 aa3.98□□□□□ -1.77
NPRL3-201ENST00000399953 MT4P47944 62 aa3.79□□□□□ -1.8
NPRL3-201ENST00000399953 NEBP20929 6669 aa3.78□□□□□ -1.8
NPRL3-201ENST00000399953 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
NPRL3-201ENST00000399953 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
NPRL3-201ENST00000399953 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
NPRL3-201ENST00000399953 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
NPRL3-201ENST00000399953 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
NPRL3-201ENST00000399953 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
NPRL3-201ENST00000399953 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
NPRL3-201ENST00000399953 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
NPRL3-201ENST00000399953 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
NPRL3-201ENST00000399953 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
NPRL3-201ENST00000399953 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
NPRL3-201ENST00000399953 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
NPRL3-201ENST00000399953 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
NPRL3-201ENST00000399953 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
NPRL3-201ENST00000399953 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
NPRL3-201ENST00000399953 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
NPRL3-201ENST00000399953 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
NPRL3-201ENST00000399953 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
NPRL3-201ENST00000399953 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
NPRL3-201ENST00000399953 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
NPRL3-201ENST00000399953 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
NPRL3-201ENST00000399953 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
NPRL3-201ENST00000399953 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
NPRL3-201ENST00000399953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.97
NPRL3-201ENST00000399953 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
NPRL3-201ENST00000399953 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
NPRL3-201ENST00000399953 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
NPRL3-201ENST00000399953 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
NPRL3-201ENST00000399953 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
NPRL3-201ENST00000399953 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
NPRL3-201ENST00000399953 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
NPRL3-201ENST00000399953 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms