RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 KRTAP2-4Q9BYR9 128 aa7.83□□□□□ -1.16
RABGGTA-202ENST00000399409 KRTAP2-1Q9BYU5 128 aa7.83□□□□□ -1.16
RABGGTA-202ENST00000399409 FCGBPQ9Y6R7 5405 aaPredicted RBP7.79□□□□□ -1.16
RABGGTA-202ENST00000399409 CRCT1Q9UGL9 99 aa7.64□□□□□ -1.19
RABGGTA-202ENST00000399409 MT1GP13640 62 aa7.59□□□□□ -1.19
RABGGTA-202ENST00000399409 KRTAP19-3Q7Z4W3 81 aa7.58□□□□□ -1.2
RABGGTA-202ENST00000399409 MT1MQ8N339 61 aa7.55□□□□□ -1.2
RABGGTA-202ENST00000399409 MACF1Q9UPN3 7388 aaKnown RBP7.53□□□□□ -1.2
RABGGTA-202ENST00000399409 KRTAP4-3Q9BYR4 195 aa7.49□□□□□ -1.21
RABGGTA-202ENST00000399409 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
RABGGTA-202ENST00000399409 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
RABGGTA-202ENST00000399409 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
RABGGTA-202ENST00000399409 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.24
RABGGTA-202ENST00000399409 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
RABGGTA-202ENST00000399409 MUC12Q9UKN1 5478 aa7.27□□□□□ -1.25
RABGGTA-202ENST00000399409 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
RABGGTA-202ENST00000399409 MDN1Q9NU22 5596 aa7.01□□□□□ -1.29
RABGGTA-202ENST00000399409 KRTAP5-9P26371 169 aa6.91□□□□□ -1.3
RABGGTA-202ENST00000399409 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
RABGGTA-202ENST00000399409 KRTAP12-4P60329 112 aa6.84□□□□□ -1.31
RABGGTA-202ENST00000399409 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
RABGGTA-202ENST00000399409 MT1AP04731 61 aa6.81□□□□□ -1.32
RABGGTA-202ENST00000399409 KRTAP6-1Q3LI64 71 aa6.79□□□□□ -1.32
RABGGTA-202ENST00000399409 KRTAP6-3Q3LI67 103 aa6.78□□□□□ -1.32
RABGGTA-202ENST00000399409 DSTQ03001 7570 aaKnown RBP6.76□□□□□ -1.33
RABGGTA-202ENST00000399409 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
RABGGTA-202ENST00000399409 SPRR2EP22531 72 aa6.7□□□□□ -1.34
RABGGTA-202ENST00000399409 SPRR2BP35325 72 aa6.7□□□□□ -1.34
RABGGTA-202ENST00000399409 SPRR2AP35326 72 aa6.7□□□□□ -1.34
RABGGTA-202ENST00000399409 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
RABGGTA-202ENST00000399409 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
RABGGTA-202ENST00000399409 NEBP20929 6669 aa6.52□□□□□ -1.37
RABGGTA-202ENST00000399409 LCE3DQ9BYE3 92 aa6.5□□□□□ -1.37
RABGGTA-202ENST00000399409 SPRR2DP22532 72 aa6.43□□□□□ -1.38
RABGGTA-202ENST00000399409 LCE3EQ5T5B0 92 aa6.42□□□□□ -1.38
RABGGTA-202ENST00000399409 KRTAP9-4Q9BYQ2 154 aa6.42□□□□□ -1.38
RABGGTA-202ENST00000399409 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
RABGGTA-202ENST00000399409 MT3P25713 68 aa6.14□□□□□ -1.43
RABGGTA-202ENST00000399409 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
RABGGTA-202ENST00000399409 PRM1P04553 51 aa6.01□□□□□ -1.45
RABGGTA-202ENST00000399409 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
RABGGTA-202ENST00000399409 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
RABGGTA-202ENST00000399409 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
RABGGTA-202ENST00000399409 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
RABGGTA-202ENST00000399409 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
RABGGTA-202ENST00000399409 MT4P47944 62 aa5.63□□□□□ -1.51
RABGGTA-202ENST00000399409 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
RABGGTA-202ENST00000399409 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
RABGGTA-202ENST00000399409 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
RABGGTA-202ENST00000399409 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
RABGGTA-202ENST00000399409 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
RABGGTA-202ENST00000399409 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
RABGGTA-202ENST00000399409 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
RABGGTA-202ENST00000399409 MUC5ACP98088 5654 aa5.01□□□□□ -1.61
RABGGTA-202ENST00000399409 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
RABGGTA-202ENST00000399409 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
RABGGTA-202ENST00000399409 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
RABGGTA-202ENST00000399409 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
RABGGTA-202ENST00000399409 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
RABGGTA-202ENST00000399409 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
RABGGTA-202ENST00000399409 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
RABGGTA-202ENST00000399409 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
RABGGTA-202ENST00000399409 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
RABGGTA-202ENST00000399409 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
RABGGTA-202ENST00000399409 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
RABGGTA-202ENST00000399409 KRTAP21-2Q3LI59 83 aa4.41□□□□□ -1.7
RABGGTA-202ENST00000399409 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
RABGGTA-202ENST00000399409 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
RABGGTA-202ENST00000399409 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
RABGGTA-202ENST00000399409 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
RABGGTA-202ENST00000399409 KRTAP21-1Q3LI58 79 aa3.82□□□□□ -1.8
RABGGTA-202ENST00000399409 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
RABGGTA-202ENST00000399409 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
RABGGTA-202ENST00000399409 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
RABGGTA-202ENST00000399409 LCE1FQ5T754 118 aa3.46□□□□□ -1.85
RABGGTA-202ENST00000399409 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
RABGGTA-202ENST00000399409 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms