RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 MT1LQ93083 61 aa4.74□□□□□ -1.65
APOB-202ENST00000399256 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
APOB-202ENST00000399256 MT1EP04732 61 aa4.69□□□□□ -1.66
APOB-202ENST00000399256 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
APOB-202ENST00000399256 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.68
APOB-202ENST00000399256 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
APOB-202ENST00000399256 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
APOB-202ENST00000399256 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
APOB-202ENST00000399256 MT1GP13640 62 aa4.5□□□□□ -1.69
APOB-202ENST00000399256 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
APOB-202ENST00000399256 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.7
APOB-202ENST00000399256 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
APOB-202ENST00000399256 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
APOB-202ENST00000399256 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
APOB-202ENST00000399256 MT1MQ8N339 61 aa4.37□□□□□ -1.71
APOB-202ENST00000399256 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
APOB-202ENST00000399256 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
APOB-202ENST00000399256 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
APOB-202ENST00000399256 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
APOB-202ENST00000399256 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
APOB-202ENST00000399256 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
APOB-202ENST00000399256 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
APOB-202ENST00000399256 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
APOB-202ENST00000399256 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
APOB-202ENST00000399256 SPRR2EP22531 72 aa4.17□□□□□ -1.74
APOB-202ENST00000399256 SPRR2BP35325 72 aa4.17□□□□□ -1.74
APOB-202ENST00000399256 SPRR2AP35326 72 aa4.17□□□□□ -1.74
APOB-202ENST00000399256 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
APOB-202ENST00000399256 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
APOB-202ENST00000399256 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
APOB-202ENST00000399256 MT1AP04731 61 aa4.05□□□□□ -1.76
APOB-202ENST00000399256 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
APOB-202ENST00000399256 SPRR2DP22532 72 aa4.01□□□□□ -1.77
APOB-202ENST00000399256 NEBP20929 6669 aa3.99□□□□□ -1.77
APOB-202ENST00000399256 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
APOB-202ENST00000399256 PRM1P04553 51 aa3.97□□□□□ -1.77
APOB-202ENST00000399256 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
APOB-202ENST00000399256 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
APOB-202ENST00000399256 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
APOB-202ENST00000399256 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
APOB-202ENST00000399256 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
APOB-202ENST00000399256 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
APOB-202ENST00000399256 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
APOB-202ENST00000399256 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
APOB-202ENST00000399256 MT3P25713 68 aa3.53□□□□□ -1.85
APOB-202ENST00000399256 MT4P47944 62 aa3.49□□□□□ -1.85
APOB-202ENST00000399256 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
APOB-202ENST00000399256 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
APOB-202ENST00000399256 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
APOB-202ENST00000399256 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
APOB-202ENST00000399256 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
APOB-202ENST00000399256 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
APOB-202ENST00000399256 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
APOB-202ENST00000399256 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
APOB-202ENST00000399256 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
APOB-202ENST00000399256 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
APOB-202ENST00000399256 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
APOB-202ENST00000399256 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
APOB-202ENST00000399256 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
APOB-202ENST00000399256 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
APOB-202ENST00000399256 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
APOB-202ENST00000399256 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
APOB-202ENST00000399256 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
APOB-202ENST00000399256 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
APOB-202ENST00000399256 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
APOB-202ENST00000399256 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
APOB-202ENST00000399256 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
APOB-202ENST00000399256 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
APOB-202ENST00000399256 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
APOB-202ENST00000399256 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.01
APOB-202ENST00000399256 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
APOB-202ENST00000399256 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
APOB-202ENST00000399256 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
APOB-202ENST00000399256 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
APOB-202ENST00000399256 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
APOB-202ENST00000399256 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
APOB-202ENST00000399256 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms