RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
CSNK1E-203ENST00000396832 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
CSNK1E-203ENST00000396832 KRTAP4-3Q9BYR4 195 aa7.98□□□□□ -1.13
CSNK1E-203ENST00000396832 DSTQ03001 7570 aaKnown RBP7.93□□□□□ -1.14
CSNK1E-203ENST00000396832 CRCT1Q9UGL9 99 aa7.9□□□□□ -1.14
CSNK1E-203ENST00000396832 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
CSNK1E-203ENST00000396832 MT1GP13640 62 aa7.82□□□□□ -1.16
CSNK1E-203ENST00000396832 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
CSNK1E-203ENST00000396832 SYNE2Q8WXH0 6885 aaKnown RBP7.7□□□□□ -1.18
CSNK1E-203ENST00000396832 LCE2DQ5TA82 110 aaPredicted RBP7.69□□□□□ -1.18
CSNK1E-203ENST00000396832 KRTAP12-4P60329 112 aa7.68□□□□□ -1.18
CSNK1E-203ENST00000396832 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
CSNK1E-203ENST00000396832 MT1MQ8N339 61 aa7.54□□□□□ -1.2
CSNK1E-203ENST00000396832 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
CSNK1E-203ENST00000396832 SYNE1Q8NF91 8797 aaKnown RBP7.43□□□□□ -1.22
CSNK1E-203ENST00000396832 MDN1Q9NU22 5596 aa7.4□□□□□ -1.22
CSNK1E-203ENST00000396832 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
CSNK1E-203ENST00000396832 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
CSNK1E-203ENST00000396832 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
CSNK1E-203ENST00000396832 LCE5AQ5TCM9 118 aa7.14□□□□□ -1.27
CSNK1E-203ENST00000396832 OBSCNQ5VST9 7968 aa7.06□□□□□ -1.28
CSNK1E-203ENST00000396832 KRTAP6-1Q3LI64 71 aa7.01□□□□□ -1.29
CSNK1E-203ENST00000396832 MT1AP04731 61 aa7□□□□□ -1.29
CSNK1E-203ENST00000396832 LCE3DQ9BYE3 92 aa6.91□□□□□ -1.3
CSNK1E-203ENST00000396832 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.31
CSNK1E-203ENST00000396832 PRM1P04553 51 aa6.86□□□□□ -1.31
CSNK1E-203ENST00000396832 LCE3EQ5T5B0 92 aa6.86□□□□□ -1.31
CSNK1E-203ENST00000396832 LCE1AQ5T7P2 110 aa6.85□□□□□ -1.31
CSNK1E-203ENST00000396832 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
CSNK1E-203ENST00000396832 SPRR2EP22531 72 aa6.83□□□□□ -1.32
CSNK1E-203ENST00000396832 SPRR2BP35325 72 aa6.83□□□□□ -1.32
CSNK1E-203ENST00000396832 SPRR2AP35326 72 aa6.83□□□□□ -1.32
CSNK1E-203ENST00000396832 KRTAP5-9P26371 169 aa6.78□□□□□ -1.32
CSNK1E-203ENST00000396832 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
CSNK1E-203ENST00000396832 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
CSNK1E-203ENST00000396832 SPRR2DP22532 72 aa6.52□□□□□ -1.37
CSNK1E-203ENST00000396832 KRTAP6-2Q3LI66 62 aa6.47□□□□□ -1.37
CSNK1E-203ENST00000396832 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.37
CSNK1E-203ENST00000396832 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
CSNK1E-203ENST00000396832 NEBP20929 6669 aa6.27□□□□□ -1.41
CSNK1E-203ENST00000396832 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
CSNK1E-203ENST00000396832 MT3P25713 68 aa6.02□□□□□ -1.45
CSNK1E-203ENST00000396832 MT4P47944 62 aa5.93□□□□□ -1.46
CSNK1E-203ENST00000396832 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
CSNK1E-203ENST00000396832 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
CSNK1E-203ENST00000396832 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.5
CSNK1E-203ENST00000396832 LCE1DQ5T752 114 aa5.55□□□□□ -1.52
CSNK1E-203ENST00000396832 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
CSNK1E-203ENST00000396832 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
CSNK1E-203ENST00000396832 LCE1EQ5T753 118 aa5.48□□□□□ -1.53
CSNK1E-203ENST00000396832 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
CSNK1E-203ENST00000396832 MUC5ACP98088 5654 aa5.37□□□□□ -1.55
CSNK1E-203ENST00000396832 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
CSNK1E-203ENST00000396832 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
CSNK1E-203ENST00000396832 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
CSNK1E-203ENST00000396832 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
CSNK1E-203ENST00000396832 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
CSNK1E-203ENST00000396832 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
CSNK1E-203ENST00000396832 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
CSNK1E-203ENST00000396832 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
CSNK1E-203ENST00000396832 MUC19Q7Z5P9 8384 aa4.5□□□□□ -1.69
CSNK1E-203ENST00000396832 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
CSNK1E-203ENST00000396832 KRTAP5-8O75690 187 aa4.48□□□□□ -1.69
CSNK1E-203ENST00000396832 KRTAP21-2Q3LI59 83 aa4.42□□□□□ -1.7
CSNK1E-203ENST00000396832 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
CSNK1E-203ENST00000396832 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
CSNK1E-203ENST00000396832 KRTAP21-1Q3LI58 79 aa4.34□□□□□ -1.71
CSNK1E-203ENST00000396832 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
CSNK1E-203ENST00000396832 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
CSNK1E-203ENST00000396832 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
CSNK1E-203ENST00000396832 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
CSNK1E-203ENST00000396832 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
CSNK1E-203ENST00000396832 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
CSNK1E-203ENST00000396832 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
CSNK1E-203ENST00000396832 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
CSNK1E-203ENST00000396832 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
CSNK1E-203ENST00000396832 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms