RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 SPRR2EP22531 72 aa4.07□□□□□ -1.76
ATN1-202ENST00000396684 SPRR2BP35325 72 aa4.07□□□□□ -1.76
ATN1-202ENST00000396684 SPRR2AP35326 72 aa4.07□□□□□ -1.76
ATN1-202ENST00000396684 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
ATN1-202ENST00000396684 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
ATN1-202ENST00000396684 MT1MQ8N339 61 aa3.96□□□□□ -1.78
ATN1-202ENST00000396684 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
ATN1-202ENST00000396684 KMT2DO14686 5537 aa3.94□□□□□ -1.78
ATN1-202ENST00000396684 SPRR2DP22532 72 aa3.93□□□□□ -1.78
ATN1-202ENST00000396684 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
ATN1-202ENST00000396684 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
ATN1-202ENST00000396684 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.78
ATN1-202ENST00000396684 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
ATN1-202ENST00000396684 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
ATN1-202ENST00000396684 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
ATN1-202ENST00000396684 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
ATN1-202ENST00000396684 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
ATN1-202ENST00000396684 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
ATN1-202ENST00000396684 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
ATN1-202ENST00000396684 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
ATN1-202ENST00000396684 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
ATN1-202ENST00000396684 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
ATN1-202ENST00000396684 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
ATN1-202ENST00000396684 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
ATN1-202ENST00000396684 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
ATN1-202ENST00000396684 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
ATN1-202ENST00000396684 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
ATN1-202ENST00000396684 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
ATN1-202ENST00000396684 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
ATN1-202ENST00000396684 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
ATN1-202ENST00000396684 MT1AP04731 61 aa3.57□□□□□ -1.84
ATN1-202ENST00000396684 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
ATN1-202ENST00000396684 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
ATN1-202ENST00000396684 MT4P47944 62 aa3.45□□□□□ -1.86
ATN1-202ENST00000396684 MT3P25713 68 aa3.43□□□□□ -1.86
ATN1-202ENST00000396684 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
ATN1-202ENST00000396684 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
ATN1-202ENST00000396684 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
ATN1-202ENST00000396684 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
ATN1-202ENST00000396684 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
ATN1-202ENST00000396684 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
ATN1-202ENST00000396684 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
ATN1-202ENST00000396684 NEBP20929 6669 aa3.27□□□□□ -1.89
ATN1-202ENST00000396684 PRM1P04553 51 aa3.19□□□□□ -1.9
ATN1-202ENST00000396684 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
ATN1-202ENST00000396684 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
ATN1-202ENST00000396684 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
ATN1-202ENST00000396684 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
ATN1-202ENST00000396684 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
ATN1-202ENST00000396684 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
ATN1-202ENST00000396684 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
ATN1-202ENST00000396684 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
ATN1-202ENST00000396684 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
ATN1-202ENST00000396684 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
ATN1-202ENST00000396684 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
ATN1-202ENST00000396684 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
ATN1-202ENST00000396684 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
ATN1-202ENST00000396684 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
ATN1-202ENST00000396684 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
ATN1-202ENST00000396684 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
ATN1-202ENST00000396684 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
ATN1-202ENST00000396684 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
ATN1-202ENST00000396684 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
ATN1-202ENST00000396684 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
ATN1-202ENST00000396684 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
ATN1-202ENST00000396684 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
ATN1-202ENST00000396684 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
ATN1-202ENST00000396684 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
ATN1-202ENST00000396684 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
ATN1-202ENST00000396684 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
ATN1-202ENST00000396684 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
ATN1-202ENST00000396684 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
ATN1-202ENST00000396684 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
ATN1-202ENST00000396684 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.09
ATN1-202ENST00000396684 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
ATN1-202ENST00000396684 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
ATN1-202ENST00000396684 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 112.6 ms