RNA–Protein interactions for RNA: ENST00000396645.6

HMGN2P46-203, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-203ENST00000396645 MT1BP07438 61 aa3.57□□□□□ -1.84
HMGN2P46-203ENST00000396645 ROMO1P60602 79 aa3.53□□□□□ -1.84
HMGN2P46-203ENST00000396645 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
HMGN2P46-203ENST00000396645 TNP1P09430 55 aa3.47□□□□□ -1.85
HMGN2P46-203ENST00000396645 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
HMGN2P46-203ENST00000396645 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
HMGN2P46-203ENST00000396645 USH2AO75445 5202 aa3.46□□□□□ -1.86
HMGN2P46-203ENST00000396645 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
HMGN2P46-203ENST00000396645 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
HMGN2P46-203ENST00000396645 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
HMGN2P46-203ENST00000396645 MT1XP80297 61 aa3.44□□□□□ -1.86
HMGN2P46-203ENST00000396645 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
HMGN2P46-203ENST00000396645 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
HMGN2P46-203ENST00000396645 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
HMGN2P46-203ENST00000396645 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
HMGN2P46-203ENST00000396645 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
HMGN2P46-203ENST00000396645 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
HMGN2P46-203ENST00000396645 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
HMGN2P46-203ENST00000396645 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
HMGN2P46-203ENST00000396645 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
HMGN2P46-203ENST00000396645 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
HMGN2P46-203ENST00000396645 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
HMGN2P46-203ENST00000396645 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
HMGN2P46-203ENST00000396645 KRTAP8-1Q8IUC2 63 aa3.2□□□□□ -1.9
HMGN2P46-203ENST00000396645 NEBP20929 6669 aa3.19□□□□□ -1.9
HMGN2P46-203ENST00000396645 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
HMGN2P46-203ENST00000396645 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
HMGN2P46-203ENST00000396645 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
HMGN2P46-203ENST00000396645 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
HMGN2P46-203ENST00000396645 KMT2DO14686 5537 aa3.1□□□□□ -1.91
HMGN2P46-203ENST00000396645 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
HMGN2P46-203ENST00000396645 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
HMGN2P46-203ENST00000396645 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
HMGN2P46-203ENST00000396645 MT1EP04732 61 aa3.05□□□□□ -1.92
HMGN2P46-203ENST00000396645 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
HMGN2P46-203ENST00000396645 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
HMGN2P46-203ENST00000396645 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
HMGN2P46-203ENST00000396645 MT1GP13640 62 aa2.97□□□□□ -1.93
HMGN2P46-203ENST00000396645 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
HMGN2P46-203ENST00000396645 MT1LQ93083 61 aa2.97□□□□□ -1.93
HMGN2P46-203ENST00000396645 SPRR2EP22531 72 aa2.94□□□□□ -1.94
HMGN2P46-203ENST00000396645 SPRR2BP35325 72 aa2.94□□□□□ -1.94
HMGN2P46-203ENST00000396645 SPRR2AP35326 72 aa2.94□□□□□ -1.94
HMGN2P46-203ENST00000396645 MT1MQ8N339 61 aa2.87□□□□□ -1.95
HMGN2P46-203ENST00000396645 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
HMGN2P46-203ENST00000396645 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
HMGN2P46-203ENST00000396645 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
HMGN2P46-203ENST00000396645 SPRR2DP22532 72 aa2.84□□□□□ -1.95
HMGN2P46-203ENST00000396645 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
HMGN2P46-203ENST00000396645 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
HMGN2P46-203ENST00000396645 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
HMGN2P46-203ENST00000396645 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
HMGN2P46-203ENST00000396645 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
HMGN2P46-203ENST00000396645 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
HMGN2P46-203ENST00000396645 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
HMGN2P46-203ENST00000396645 MT1AP04731 61 aa2.56□□□□□ -2
HMGN2P46-203ENST00000396645 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
HMGN2P46-203ENST00000396645 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
HMGN2P46-203ENST00000396645 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
HMGN2P46-203ENST00000396645 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
HMGN2P46-203ENST00000396645 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
HMGN2P46-203ENST00000396645 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
HMGN2P46-203ENST00000396645 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
HMGN2P46-203ENST00000396645 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
HMGN2P46-203ENST00000396645 MT4P47944 62 aa2.43□□□□□ -2.02
HMGN2P46-203ENST00000396645 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
HMGN2P46-203ENST00000396645 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
HMGN2P46-203ENST00000396645 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
HMGN2P46-203ENST00000396645 INE1O15225 51 aa2.32□□□□□ -2.04
HMGN2P46-203ENST00000396645 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
HMGN2P46-203ENST00000396645 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
HMGN2P46-203ENST00000396645 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
HMGN2P46-203ENST00000396645 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
HMGN2P46-203ENST00000396645 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
HMGN2P46-203ENST00000396645 PRM1P04553 51 aa1.8□□□□□ -2.12
HMGN2P46-203ENST00000396645 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
HMGN2P46-203ENST00000396645 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
HMGN2P46-203ENST00000396645 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 32.7 ms