RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
CDKN1B-202ENST00000396340 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
CDKN1B-202ENST00000396340 DSTQ03001 7570 aaKnown RBP6.87□□□□□ -1.31
CDKN1B-202ENST00000396340 PSPHP1O15172 72 aa6.87□□□□□ -1.31
CDKN1B-202ENST00000396340 MT1LQ93083 61 aa6.86□□□□□ -1.31
CDKN1B-202ENST00000396340 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
CDKN1B-202ENST00000396340 MT1MQ8N339 61 aa6.81□□□□□ -1.32
CDKN1B-202ENST00000396340 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
CDKN1B-202ENST00000396340 A6NED7 52 aa6.75□□□□□ -1.33
CDKN1B-202ENST00000396340 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
CDKN1B-202ENST00000396340 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
CDKN1B-202ENST00000396340 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
CDKN1B-202ENST00000396340 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
CDKN1B-202ENST00000396340 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
CDKN1B-202ENST00000396340 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
CDKN1B-202ENST00000396340 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
CDKN1B-202ENST00000396340 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
CDKN1B-202ENST00000396340 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
CDKN1B-202ENST00000396340 ROMO1P60602 79 aa6.45□□□□□ -1.38
CDKN1B-202ENST00000396340 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
CDKN1B-202ENST00000396340 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
CDKN1B-202ENST00000396340 MT4P47944 62 aa6.41□□□□□ -1.38
CDKN1B-202ENST00000396340 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
CDKN1B-202ENST00000396340 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
CDKN1B-202ENST00000396340 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
CDKN1B-202ENST00000396340 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
CDKN1B-202ENST00000396340 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
CDKN1B-202ENST00000396340 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
CDKN1B-202ENST00000396340 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
CDKN1B-202ENST00000396340 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
CDKN1B-202ENST00000396340 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
CDKN1B-202ENST00000396340 GPR98Q8WXG9 6306 aa6.18□□□□□ -1.42
CDKN1B-202ENST00000396340 KRTAP20-2Q3LI61 65 aa6.07□□□□□ -1.44
CDKN1B-202ENST00000396340 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
CDKN1B-202ENST00000396340 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
CDKN1B-202ENST00000396340 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
CDKN1B-202ENST00000396340 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
CDKN1B-202ENST00000396340 MT1AP04731 61 aa5.88□□□□□ -1.47
CDKN1B-202ENST00000396340 KRTAP5-7Q6L8G8 165 aa5.79□□□□□ -1.48
CDKN1B-202ENST00000396340 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
CDKN1B-202ENST00000396340 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
CDKN1B-202ENST00000396340 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
CDKN1B-202ENST00000396340 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
CDKN1B-202ENST00000396340 H3BS24 57 aa5.71□□□□□ -1.5
CDKN1B-202ENST00000396340 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
CDKN1B-202ENST00000396340 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
CDKN1B-202ENST00000396340 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
CDKN1B-202ENST00000396340 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
CDKN1B-202ENST00000396340 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
CDKN1B-202ENST00000396340 MT3P25713 68 aa5.46□□□□□ -1.54
CDKN1B-202ENST00000396340 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
CDKN1B-202ENST00000396340 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
CDKN1B-202ENST00000396340 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
CDKN1B-202ENST00000396340 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
CDKN1B-202ENST00000396340 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
CDKN1B-202ENST00000396340 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
CDKN1B-202ENST00000396340 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
CDKN1B-202ENST00000396340 MUC5ACP98088 5654 aa4.91□□□□□ -1.62
CDKN1B-202ENST00000396340 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
CDKN1B-202ENST00000396340 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
CDKN1B-202ENST00000396340 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
CDKN1B-202ENST00000396340 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
CDKN1B-202ENST00000396340 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
CDKN1B-202ENST00000396340 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
CDKN1B-202ENST00000396340 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
CDKN1B-202ENST00000396340 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
CDKN1B-202ENST00000396340 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
CDKN1B-202ENST00000396340 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
CDKN1B-202ENST00000396340 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
CDKN1B-202ENST00000396340 INE1O15225 51 aa4.09□□□□□ -1.75
CDKN1B-202ENST00000396340 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
CDKN1B-202ENST00000396340 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
CDKN1B-202ENST00000396340 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CDKN1B-202ENST00000396340 PRM1P04553 51 aa3.21□□□□□ -1.9
CDKN1B-202ENST00000396340 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
CDKN1B-202ENST00000396340 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
CDKN1B-202ENST00000396340 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms