RNA–Protein interactions for RNA: ENST00000396253.7

HPS5-203, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS5, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-203ENST00000396253 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
HPS5-203ENST00000396253 LCE3BQ5TA77 95 aa3.45□□□□□ -1.86
HPS5-203ENST00000396253 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
HPS5-203ENST00000396253 MT1EP04732 61 aa3.42□□□□□ -1.86
HPS5-203ENST00000396253 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
HPS5-203ENST00000396253 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
HPS5-203ENST00000396253 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.86
HPS5-203ENST00000396253 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.86
HPS5-203ENST00000396253 MT1LQ93083 61 aa3.35□□□□□ -1.87
HPS5-203ENST00000396253 INE1O15225 51 aa3.34□□□□□ -1.88
HPS5-203ENST00000396253 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
HPS5-203ENST00000396253 MT1MQ8N339 61 aa3.3□□□□□ -1.88
HPS5-203ENST00000396253 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
HPS5-203ENST00000396253 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
HPS5-203ENST00000396253 USH2AO75445 5202 aa3.23□□□□□ -1.89
HPS5-203ENST00000396253 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
HPS5-203ENST00000396253 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
HPS5-203ENST00000396253 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
HPS5-203ENST00000396253 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
HPS5-203ENST00000396253 MUC2Q02817 5179 aa3.14□□□□□ -1.91
HPS5-203ENST00000396253 MT4P47944 62 aa3.12□□□□□ -1.91
HPS5-203ENST00000396253 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
HPS5-203ENST00000396253 NEBP20929 6669 aa3.09□□□□□ -1.92
HPS5-203ENST00000396253 MT3P25713 68 aa3.08□□□□□ -1.92
HPS5-203ENST00000396253 MT1AP04731 61 aa3.05□□□□□ -1.92
HPS5-203ENST00000396253 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
HPS5-203ENST00000396253 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
HPS5-203ENST00000396253 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
HPS5-203ENST00000396253 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
HPS5-203ENST00000396253 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
HPS5-203ENST00000396253 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
HPS5-203ENST00000396253 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
HPS5-203ENST00000396253 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
HPS5-203ENST00000396253 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
HPS5-203ENST00000396253 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
HPS5-203ENST00000396253 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
HPS5-203ENST00000396253 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
HPS5-203ENST00000396253 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
HPS5-203ENST00000396253 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
HPS5-203ENST00000396253 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
HPS5-203ENST00000396253 KMT2DO14686 5537 aa2.73□□□□□ -1.97
HPS5-203ENST00000396253 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
HPS5-203ENST00000396253 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
HPS5-203ENST00000396253 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
HPS5-203ENST00000396253 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
HPS5-203ENST00000396253 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
HPS5-203ENST00000396253 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
HPS5-203ENST00000396253 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
HPS5-203ENST00000396253 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
HPS5-203ENST00000396253 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
HPS5-203ENST00000396253 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
HPS5-203ENST00000396253 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
HPS5-203ENST00000396253 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
HPS5-203ENST00000396253 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
HPS5-203ENST00000396253 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
HPS5-203ENST00000396253 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
HPS5-203ENST00000396253 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
HPS5-203ENST00000396253 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
HPS5-203ENST00000396253 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
HPS5-203ENST00000396253 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
HPS5-203ENST00000396253 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
HPS5-203ENST00000396253 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
HPS5-203ENST00000396253 PRM1P04553 51 aa2.19□□□□□ -2.06
HPS5-203ENST00000396253 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
HPS5-203ENST00000396253 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
HPS5-203ENST00000396253 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
HPS5-203ENST00000396253 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
HPS5-203ENST00000396253 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
HPS5-203ENST00000396253 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
HPS5-203ENST00000396253 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
HPS5-203ENST00000396253 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
HPS5-203ENST00000396253 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
HPS5-203ENST00000396253 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
HPS5-203ENST00000396253 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
HPS5-203ENST00000396253 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
HPS5-203ENST00000396253 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
HPS5-203ENST00000396253 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms