RNA–Protein interactions for RNA: ENST00000396189.2

PDE1C-204, Transcript of phosphodiesterase 1C, humanhuman

TSL 5

Gene PDE1C, Length 605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-204ENST00000396189 TMEM258P61165 79 aa6.73□□□□□ -1.33
PDE1C-204ENST00000396189 V9GYY9 64 aa6.72□□□□□ -1.33
PDE1C-204ENST00000396189 UQCR11O14957 56 aa6.71□□□□□ -1.34
PDE1C-204ENST00000396189 LCE1DQ5T752 114 aa6.69□□□□□ -1.34
PDE1C-204ENST00000396189 GPR98Q8WXG9 6306 aa6.69□□□□□ -1.34
PDE1C-204ENST00000396189 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
PDE1C-204ENST00000396189 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
PDE1C-204ENST00000396189 MT4P47944 62 aa6.65□□□□□ -1.34
PDE1C-204ENST00000396189 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
PDE1C-204ENST00000396189 A0A0A0MQY5 61 aa6.57□□□□□ -1.36
PDE1C-204ENST00000396189 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
PDE1C-204ENST00000396189 HMCN1Q96RW7 5635 aa6.55□□□□□ -1.36
PDE1C-204ENST00000396189 H3BS24 57 aa6.54□□□□□ -1.36
PDE1C-204ENST00000396189 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
PDE1C-204ENST00000396189 K7ERS5 55 aa6.49□□□□□ -1.37
PDE1C-204ENST00000396189 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
PDE1C-204ENST00000396189 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
PDE1C-204ENST00000396189 PSPHP1O15172 72 aa6.42□□□□□ -1.38
PDE1C-204ENST00000396189 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
PDE1C-204ENST00000396189 PRO0628Q9UI54 55 aa6.38□□□□□ -1.39
PDE1C-204ENST00000396189 AHNAK2Q8IVF2 5795 aa6.35□□□□□ -1.39
PDE1C-204ENST00000396189 Q1T7F1 81 aa6.32□□□□□ -1.4
PDE1C-204ENST00000396189 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
PDE1C-204ENST00000396189 A6NED7 52 aa6.21□□□□□ -1.42
PDE1C-204ENST00000396189 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
PDE1C-204ENST00000396189 KRTAP5-10Q6L8G5 202 aa6.2□□□□□ -1.42
PDE1C-204ENST00000396189 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
PDE1C-204ENST00000396189 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
PDE1C-204ENST00000396189 KRTAP20-2Q3LI61 65 aa6.17□□□□□ -1.42
PDE1C-204ENST00000396189 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
PDE1C-204ENST00000396189 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
PDE1C-204ENST00000396189 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
PDE1C-204ENST00000396189 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
PDE1C-204ENST00000396189 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
PDE1C-204ENST00000396189 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
PDE1C-204ENST00000396189 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
PDE1C-204ENST00000396189 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
PDE1C-204ENST00000396189 ROMO1P60602 79 aa5.99□□□□□ -1.45
PDE1C-204ENST00000396189 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
PDE1C-204ENST00000396189 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
PDE1C-204ENST00000396189 MT1AP04731 61 aa5.82□□□□□ -1.48
PDE1C-204ENST00000396189 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
PDE1C-204ENST00000396189 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
PDE1C-204ENST00000396189 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
PDE1C-204ENST00000396189 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
PDE1C-204ENST00000396189 BRK1Q8WUW1 75 aa5.65□□□□□ -1.5
PDE1C-204ENST00000396189 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
PDE1C-204ENST00000396189 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
PDE1C-204ENST00000396189 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
PDE1C-204ENST00000396189 KRTAP5-8O75690 187 aa5.44□□□□□ -1.54
PDE1C-204ENST00000396189 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
PDE1C-204ENST00000396189 MT3P25713 68 aa5.34□□□□□ -1.55
PDE1C-204ENST00000396189 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
PDE1C-204ENST00000396189 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
PDE1C-204ENST00000396189 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
PDE1C-204ENST00000396189 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
PDE1C-204ENST00000396189 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
PDE1C-204ENST00000396189 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
PDE1C-204ENST00000396189 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
PDE1C-204ENST00000396189 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
PDE1C-204ENST00000396189 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
PDE1C-204ENST00000396189 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
PDE1C-204ENST00000396189 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
PDE1C-204ENST00000396189 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
PDE1C-204ENST00000396189 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
PDE1C-204ENST00000396189 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
PDE1C-204ENST00000396189 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
PDE1C-204ENST00000396189 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
PDE1C-204ENST00000396189 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
PDE1C-204ENST00000396189 INE1O15225 51 aa4.08□□□□□ -1.76
PDE1C-204ENST00000396189 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
PDE1C-204ENST00000396189 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
PDE1C-204ENST00000396189 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
PDE1C-204ENST00000396189 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
PDE1C-204ENST00000396189 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
PDE1C-204ENST00000396189 PRM1P04553 51 aa3.07□□□□□ -1.92
PDE1C-204ENST00000396189 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
PDE1C-204ENST00000396189 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 39.8 ms