RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
DDX39B-202ENST00000396172 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
DDX39B-202ENST00000396172 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
DDX39B-202ENST00000396172 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
DDX39B-202ENST00000396172 MT1EP04732 61 aa3.63□□□□□ -1.83
DDX39B-202ENST00000396172 INE1O15225 51 aa3.58□□□□□ -1.84
DDX39B-202ENST00000396172 SPRR2EP22531 72 aa3.58□□□□□ -1.84
DDX39B-202ENST00000396172 SPRR2BP35325 72 aa3.58□□□□□ -1.84
DDX39B-202ENST00000396172 SPRR2AP35326 72 aa3.58□□□□□ -1.84
DDX39B-202ENST00000396172 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
DDX39B-202ENST00000396172 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
DDX39B-202ENST00000396172 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
DDX39B-202ENST00000396172 MT1LQ93083 61 aa3.53□□□□□ -1.84
DDX39B-202ENST00000396172 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
DDX39B-202ENST00000396172 MT1GP13640 62 aa3.5□□□□□ -1.85
DDX39B-202ENST00000396172 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
DDX39B-202ENST00000396172 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
DDX39B-202ENST00000396172 SPRR2DP22532 72 aa3.46□□□□□ -1.86
DDX39B-202ENST00000396172 MT1MQ8N339 61 aa3.43□□□□□ -1.86
DDX39B-202ENST00000396172 NEBP20929 6669 aa3.42□□□□□ -1.86
DDX39B-202ENST00000396172 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
DDX39B-202ENST00000396172 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
DDX39B-202ENST00000396172 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
DDX39B-202ENST00000396172 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
DDX39B-202ENST00000396172 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.88
DDX39B-202ENST00000396172 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
DDX39B-202ENST00000396172 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
DDX39B-202ENST00000396172 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
DDX39B-202ENST00000396172 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
DDX39B-202ENST00000396172 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
DDX39B-202ENST00000396172 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
DDX39B-202ENST00000396172 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
DDX39B-202ENST00000396172 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
DDX39B-202ENST00000396172 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
DDX39B-202ENST00000396172 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
DDX39B-202ENST00000396172 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
DDX39B-202ENST00000396172 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
DDX39B-202ENST00000396172 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
DDX39B-202ENST00000396172 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
DDX39B-202ENST00000396172 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
DDX39B-202ENST00000396172 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
DDX39B-202ENST00000396172 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
DDX39B-202ENST00000396172 MT1AP04731 61 aa3.02□□□□□ -1.93
DDX39B-202ENST00000396172 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
DDX39B-202ENST00000396172 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
DDX39B-202ENST00000396172 MT4P47944 62 aa2.97□□□□□ -1.93
DDX39B-202ENST00000396172 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
DDX39B-202ENST00000396172 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
DDX39B-202ENST00000396172 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
DDX39B-202ENST00000396172 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
DDX39B-202ENST00000396172 MT3P25713 68 aa2.76□□□□□ -1.97
DDX39B-202ENST00000396172 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
DDX39B-202ENST00000396172 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
DDX39B-202ENST00000396172 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
DDX39B-202ENST00000396172 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
DDX39B-202ENST00000396172 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
DDX39B-202ENST00000396172 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
DDX39B-202ENST00000396172 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
DDX39B-202ENST00000396172 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
DDX39B-202ENST00000396172 PRM1P04553 51 aa2.45□□□□□ -2.02
DDX39B-202ENST00000396172 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
DDX39B-202ENST00000396172 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
DDX39B-202ENST00000396172 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
DDX39B-202ENST00000396172 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
DDX39B-202ENST00000396172 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
DDX39B-202ENST00000396172 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
DDX39B-202ENST00000396172 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
DDX39B-202ENST00000396172 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
DDX39B-202ENST00000396172 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
DDX39B-202ENST00000396172 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
DDX39B-202ENST00000396172 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
DDX39B-202ENST00000396172 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
DDX39B-202ENST00000396172 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
DDX39B-202ENST00000396172 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
DDX39B-202ENST00000396172 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
DDX39B-202ENST00000396172 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
DDX39B-202ENST00000396172 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 13.9 ms