RNA–Protein interactions for RNA: ENST00000395965.7

FAM172A-201, Transcript of family with sequence similarity 172 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM172A, Length 4,312 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-201ENST00000395965 PRM1P04553 51 aa3.36□□□□□ -1.87
FAM172A-201ENST00000395965 MT3P25713 68 aa3.33□□□□□ -1.88
FAM172A-201ENST00000395965 KRTAP4-8A0A0G2JLE6 195 aa3.32□□□□□ -1.88
FAM172A-201ENST00000395965 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
FAM172A-201ENST00000395965 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
FAM172A-201ENST00000395965 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
FAM172A-201ENST00000395965 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
FAM172A-201ENST00000395965 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
FAM172A-201ENST00000395965 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
FAM172A-201ENST00000395965 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
FAM172A-201ENST00000395965 MT1LQ93083 61 aa3.23□□□□□ -1.89
FAM172A-201ENST00000395965 SPRR2EP22531 72 aa3.2□□□□□ -1.9
FAM172A-201ENST00000395965 SPRR2BP35325 72 aa3.2□□□□□ -1.9
FAM172A-201ENST00000395965 SPRR2AP35326 72 aa3.2□□□□□ -1.9
FAM172A-201ENST00000395965 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
FAM172A-201ENST00000395965 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
FAM172A-201ENST00000395965 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.91
FAM172A-201ENST00000395965 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
FAM172A-201ENST00000395965 MT1EP04732 61 aa3.13□□□□□ -1.91
FAM172A-201ENST00000395965 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
FAM172A-201ENST00000395965 SPRR2DP22532 72 aa3.08□□□□□ -1.92
FAM172A-201ENST00000395965 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
FAM172A-201ENST00000395965 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
FAM172A-201ENST00000395965 MT1MQ8N339 61 aa3.02□□□□□ -1.93
FAM172A-201ENST00000395965 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
FAM172A-201ENST00000395965 KRTAP9-2Q9BYQ4 174 aa2.94□□□□□ -1.94
FAM172A-201ENST00000395965 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
FAM172A-201ENST00000395965 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
FAM172A-201ENST00000395965 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
FAM172A-201ENST00000395965 MT1AP04731 61 aa2.87□□□□□ -1.95
FAM172A-201ENST00000395965 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
FAM172A-201ENST00000395965 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.95
FAM172A-201ENST00000395965 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
FAM172A-201ENST00000395965 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
FAM172A-201ENST00000395965 KRTAP9-6A0A140TA67 174 aa2.81□□□□□ -1.96
FAM172A-201ENST00000395965 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
FAM172A-201ENST00000395965 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
FAM172A-201ENST00000395965 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
FAM172A-201ENST00000395965 MT4P47944 62 aa2.74□□□□□ -1.97
FAM172A-201ENST00000395965 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
FAM172A-201ENST00000395965 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
FAM172A-201ENST00000395965 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
FAM172A-201ENST00000395965 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
FAM172A-201ENST00000395965 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
FAM172A-201ENST00000395965 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
FAM172A-201ENST00000395965 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
FAM172A-201ENST00000395965 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
FAM172A-201ENST00000395965 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
FAM172A-201ENST00000395965 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
FAM172A-201ENST00000395965 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.49□□□□□ -2.01
FAM172A-201ENST00000395965 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
FAM172A-201ENST00000395965 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
FAM172A-201ENST00000395965 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
FAM172A-201ENST00000395965 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
FAM172A-201ENST00000395965 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
FAM172A-201ENST00000395965 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
FAM172A-201ENST00000395965 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
FAM172A-201ENST00000395965 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
FAM172A-201ENST00000395965 NEBP20929 6669 aa2.16□□□□□ -2.06
FAM172A-201ENST00000395965 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
FAM172A-201ENST00000395965 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
FAM172A-201ENST00000395965 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
FAM172A-201ENST00000395965 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
FAM172A-201ENST00000395965 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
FAM172A-201ENST00000395965 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.1
FAM172A-201ENST00000395965 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
FAM172A-201ENST00000395965 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
FAM172A-201ENST00000395965 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
FAM172A-201ENST00000395965 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
FAM172A-201ENST00000395965 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
FAM172A-201ENST00000395965 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
FAM172A-201ENST00000395965 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
FAM172A-201ENST00000395965 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
FAM172A-201ENST00000395965 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
FAM172A-201ENST00000395965 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
FAM172A-201ENST00000395965 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
FAM172A-201ENST00000395965 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 297.4 ms