RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
CCR9-203ENST00000395963 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
CCR9-203ENST00000395963 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
CCR9-203ENST00000395963 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
CCR9-203ENST00000395963 MT1EP04732 61 aa3.25□□□□□ -1.89
CCR9-203ENST00000395963 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
CCR9-203ENST00000395963 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
CCR9-203ENST00000395963 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
CCR9-203ENST00000395963 MT1GP13640 62 aa3.16□□□□□ -1.9
CCR9-203ENST00000395963 MT1LQ93083 61 aa3.16□□□□□ -1.9
CCR9-203ENST00000395963 KMT2DO14686 5537 aa3.14□□□□□ -1.91
CCR9-203ENST00000395963 SPRR2EP22531 72 aa3.13□□□□□ -1.91
CCR9-203ENST00000395963 SPRR2BP35325 72 aa3.13□□□□□ -1.91
CCR9-203ENST00000395963 SPRR2AP35326 72 aa3.13□□□□□ -1.91
CCR9-203ENST00000395963 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
CCR9-203ENST00000395963 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
CCR9-203ENST00000395963 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CCR9-203ENST00000395963 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
CCR9-203ENST00000395963 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CCR9-203ENST00000395963 NEBP20929 6669 aa3.01□□□□□ -1.93
CCR9-203ENST00000395963 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
CCR9-203ENST00000395963 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
CCR9-203ENST00000395963 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
CCR9-203ENST00000395963 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
CCR9-203ENST00000395963 LCE3BQ5TA77 95 aa2.92□□□□□ -1.94
CCR9-203ENST00000395963 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
CCR9-203ENST00000395963 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
CCR9-203ENST00000395963 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
CCR9-203ENST00000395963 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
CCR9-203ENST00000395963 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
CCR9-203ENST00000395963 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
CCR9-203ENST00000395963 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.96
CCR9-203ENST00000395963 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
CCR9-203ENST00000395963 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
CCR9-203ENST00000395963 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
CCR9-203ENST00000395963 MT1AP04731 61 aa2.73□□□□□ -1.97
CCR9-203ENST00000395963 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
CCR9-203ENST00000395963 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
CCR9-203ENST00000395963 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
CCR9-203ENST00000395963 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
CCR9-203ENST00000395963 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
CCR9-203ENST00000395963 KRTAP9-4Q9BYQ2 154 aa2.59□□□□□ -2
CCR9-203ENST00000395963 LCE1DQ5T752 114 aa2.58□□□□□ -2
CCR9-203ENST00000395963 MT4P47944 62 aa2.55□□□□□ -2
CCR9-203ENST00000395963 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
CCR9-203ENST00000395963 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
CCR9-203ENST00000395963 MT3P25713 68 aa2.49□□□□□ -2.01
CCR9-203ENST00000395963 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
CCR9-203ENST00000395963 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
CCR9-203ENST00000395963 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
CCR9-203ENST00000395963 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
CCR9-203ENST00000395963 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
CCR9-203ENST00000395963 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
CCR9-203ENST00000395963 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
CCR9-203ENST00000395963 PRM1P04553 51 aa2.35□□□□□ -2.03
CCR9-203ENST00000395963 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
CCR9-203ENST00000395963 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.04
CCR9-203ENST00000395963 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CCR9-203ENST00000395963 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
CCR9-203ENST00000395963 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
CCR9-203ENST00000395963 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
CCR9-203ENST00000395963 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
CCR9-203ENST00000395963 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
CCR9-203ENST00000395963 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
CCR9-203ENST00000395963 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
CCR9-203ENST00000395963 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CCR9-203ENST00000395963 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
CCR9-203ENST00000395963 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CCR9-203ENST00000395963 MUC5ACP98088 5654 aa2□□□□□ -2.09
CCR9-203ENST00000395963 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
CCR9-203ENST00000395963 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
CCR9-203ENST00000395963 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
CCR9-203ENST00000395963 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CCR9-203ENST00000395963 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
CCR9-203ENST00000395963 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CCR9-203ENST00000395963 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
CCR9-203ENST00000395963 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 46.9 ms