RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
CXCL12-204ENST00000395793 ANAPC13Q9BS18 74 aa6.13□□□□□ -1.43
CXCL12-204ENST00000395793 CCDC179H3BU77 68 aa6.09□□□□□ -1.43
CXCL12-204ENST00000395793 AHNAK2Q8IVF2 5795 aa6.09□□□□□ -1.44
CXCL12-204ENST00000395793 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
CXCL12-204ENST00000395793 KRTAP5-10Q6L8G5 202 aa6.06□□□□□ -1.44
CXCL12-204ENST00000395793 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
CXCL12-204ENST00000395793 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
CXCL12-204ENST00000395793 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
CXCL12-204ENST00000395793 PCP4P48539 62 aa5.99□□□□□ -1.45
CXCL12-204ENST00000395793 ATP5EP56381 51 aaPredicted RBP5.98□□□□□ -1.45
CXCL12-204ENST00000395793 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
CXCL12-204ENST00000395793 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
CXCL12-204ENST00000395793 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
CXCL12-204ENST00000395793 UQCR11O14957 56 aa5.87□□□□□ -1.47
CXCL12-204ENST00000395793 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
CXCL12-204ENST00000395793 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
CXCL12-204ENST00000395793 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
CXCL12-204ENST00000395793 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
CXCL12-204ENST00000395793 TMEM258P61165 79 aa5.78□□□□□ -1.48
CXCL12-204ENST00000395793 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
CXCL12-204ENST00000395793 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
CXCL12-204ENST00000395793 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.5
CXCL12-204ENST00000395793 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
CXCL12-204ENST00000395793 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
CXCL12-204ENST00000395793 K7ERS5 55 aa5.59□□□□□ -1.51
CXCL12-204ENST00000395793 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
CXCL12-204ENST00000395793 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
CXCL12-204ENST00000395793 PSPHP1O15172 72 aa5.56□□□□□ -1.52
CXCL12-204ENST00000395793 Q1T7F1 81 aa5.47□□□□□ -1.53
CXCL12-204ENST00000395793 V9GYY9 64 aa5.46□□□□□ -1.54
CXCL12-204ENST00000395793 MT1AP04731 61 aa5.45□□□□□ -1.54
CXCL12-204ENST00000395793 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
CXCL12-204ENST00000395793 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
CXCL12-204ENST00000395793 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
CXCL12-204ENST00000395793 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
CXCL12-204ENST00000395793 A6NED7 52 aa5.32□□□□□ -1.56
CXCL12-204ENST00000395793 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
CXCL12-204ENST00000395793 RPS28P62857 69 aaKnown RBP5.27□□□□□ -1.57
CXCL12-204ENST00000395793 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
CXCL12-204ENST00000395793 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
CXCL12-204ENST00000395793 ROMO1P60602 79 aa5.25□□□□□ -1.57
CXCL12-204ENST00000395793 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
CXCL12-204ENST00000395793 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
CXCL12-204ENST00000395793 H3BS24 57 aa5.12□□□□□ -1.59
CXCL12-204ENST00000395793 MUC5ACP98088 5654 aa5.03□□□□□ -1.6
CXCL12-204ENST00000395793 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
CXCL12-204ENST00000395793 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
CXCL12-204ENST00000395793 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
CXCL12-204ENST00000395793 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
CXCL12-204ENST00000395793 MT3P25713 68 aa4.95□□□□□ -1.62
CXCL12-204ENST00000395793 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
CXCL12-204ENST00000395793 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
CXCL12-204ENST00000395793 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
CXCL12-204ENST00000395793 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
CXCL12-204ENST00000395793 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
CXCL12-204ENST00000395793 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
CXCL12-204ENST00000395793 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
CXCL12-204ENST00000395793 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
CXCL12-204ENST00000395793 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
CXCL12-204ENST00000395793 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
CXCL12-204ENST00000395793 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
CXCL12-204ENST00000395793 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
CXCL12-204ENST00000395793 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
CXCL12-204ENST00000395793 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
CXCL12-204ENST00000395793 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
CXCL12-204ENST00000395793 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CXCL12-204ENST00000395793 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
CXCL12-204ENST00000395793 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
CXCL12-204ENST00000395793 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
CXCL12-204ENST00000395793 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
CXCL12-204ENST00000395793 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
CXCL12-204ENST00000395793 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
CXCL12-204ENST00000395793 INE1O15225 51 aa3.06□□□□□ -1.92
CXCL12-204ENST00000395793 PRM1P04553 51 aa2.7□□□□□ -1.98
CXCL12-204ENST00000395793 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
CXCL12-204ENST00000395793 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 71.6 ms