RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
SREBF1-204ENST00000395756 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
SREBF1-204ENST00000395756 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
SREBF1-204ENST00000395756 KRTAP4-3Q9BYR4 195 aa6.12□□□□□ -1.43
SREBF1-204ENST00000395756 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
SREBF1-204ENST00000395756 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
SREBF1-204ENST00000395756 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
SREBF1-204ENST00000395756 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
SREBF1-204ENST00000395756 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
SREBF1-204ENST00000395756 MT1GP13640 62 aa5.96□□□□□ -1.46
SREBF1-204ENST00000395756 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
SREBF1-204ENST00000395756 MT1MQ8N339 61 aa5.92□□□□□ -1.46
SREBF1-204ENST00000395756 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
SREBF1-204ENST00000395756 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
SREBF1-204ENST00000395756 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
SREBF1-204ENST00000395756 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
SREBF1-204ENST00000395756 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
SREBF1-204ENST00000395756 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
SREBF1-204ENST00000395756 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
SREBF1-204ENST00000395756 SPRR2EP22531 72 aa5.56□□□□□ -1.52
SREBF1-204ENST00000395756 SPRR2BP35325 72 aa5.56□□□□□ -1.52
SREBF1-204ENST00000395756 SPRR2AP35326 72 aa5.56□□□□□ -1.52
SREBF1-204ENST00000395756 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
SREBF1-204ENST00000395756 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
SREBF1-204ENST00000395756 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
SREBF1-204ENST00000395756 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
SREBF1-204ENST00000395756 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
SREBF1-204ENST00000395756 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SREBF1-204ENST00000395756 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
SREBF1-204ENST00000395756 SPRR2DP22532 72 aa5.31□□□□□ -1.56
SREBF1-204ENST00000395756 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
SREBF1-204ENST00000395756 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
SREBF1-204ENST00000395756 MT1AP04731 61 aa5.21□□□□□ -1.58
SREBF1-204ENST00000395756 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
SREBF1-204ENST00000395756 NEBP20929 6669 aa5.05□□□□□ -1.6
SREBF1-204ENST00000395756 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
SREBF1-204ENST00000395756 PRM1P04553 51 aa4.97□□□□□ -1.61
SREBF1-204ENST00000395756 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
SREBF1-204ENST00000395756 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
SREBF1-204ENST00000395756 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
SREBF1-204ENST00000395756 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
SREBF1-204ENST00000395756 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
SREBF1-204ENST00000395756 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
SREBF1-204ENST00000395756 MT4P47944 62 aa4.8□□□□□ -1.64
SREBF1-204ENST00000395756 MT3P25713 68 aa4.74□□□□□ -1.65
SREBF1-204ENST00000395756 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
SREBF1-204ENST00000395756 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
SREBF1-204ENST00000395756 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
SREBF1-204ENST00000395756 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
SREBF1-204ENST00000395756 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
SREBF1-204ENST00000395756 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
SREBF1-204ENST00000395756 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
SREBF1-204ENST00000395756 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
SREBF1-204ENST00000395756 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
SREBF1-204ENST00000395756 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
SREBF1-204ENST00000395756 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
SREBF1-204ENST00000395756 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
SREBF1-204ENST00000395756 MUC19Q7Z5P9 8384 aa3.96□□□□□ -1.78
SREBF1-204ENST00000395756 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
SREBF1-204ENST00000395756 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
SREBF1-204ENST00000395756 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
SREBF1-204ENST00000395756 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
SREBF1-204ENST00000395756 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
SREBF1-204ENST00000395756 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
SREBF1-204ENST00000395756 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
SREBF1-204ENST00000395756 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
SREBF1-204ENST00000395756 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
SREBF1-204ENST00000395756 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
SREBF1-204ENST00000395756 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
SREBF1-204ENST00000395756 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SREBF1-204ENST00000395756 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.88
SREBF1-204ENST00000395756 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
SREBF1-204ENST00000395756 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
SREBF1-204ENST00000395756 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
SREBF1-204ENST00000395756 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
SREBF1-204ENST00000395756 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
SREBF1-204ENST00000395756 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
SREBF1-204ENST00000395756 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms