RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 KMT2AQ03164 3969 aa1.84□□□□□ -2.12
A1CF-207ENST00000395495 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
A1CF-207ENST00000395495 KRTAP9-8Q9BYQ0 159 aa1.8□□□□□ -2.12
A1CF-207ENST00000395495 MT3P25713 68 aa1.8□□□□□ -2.12
A1CF-207ENST00000395495 KRTAP9-3Q9BYQ3 159 aa1.8□□□□□ -2.12
A1CF-207ENST00000395495 RNF213Q63HN8 5207 aa1.78□□□□□ -2.13
A1CF-207ENST00000395495 FLGP20930 4061 aaPredicted RBP1.77□□□□□ -2.13
A1CF-207ENST00000395495 KRTAP4-7Q9BYR0 210 aa1.77□□□□□ -2.13
A1CF-207ENST00000395495 PKHD1P08F94 4074 aa1.77□□□□□ -2.13
A1CF-207ENST00000395495 LPAP08519 4548 aa1.76□□□□□ -2.13
A1CF-207ENST00000395495 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
A1CF-207ENST00000395495 SSPOA2VEC9 5147 aa1.76□□□□□ -2.13
A1CF-207ENST00000395495 VPS13BQ7Z7G8 4022 aa1.74□□□□□ -2.13
A1CF-207ENST00000395495 LCE4AQ5TA78 99 aa1.74□□□□□ -2.13
A1CF-207ENST00000395495 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
A1CF-207ENST00000395495 MUC2Q02817 5179 aa1.73□□□□□ -2.13
A1CF-207ENST00000395495 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
A1CF-207ENST00000395495 KRTAP19-3Q7Z4W3 81 aa1.71□□□□□ -2.14
A1CF-207ENST00000395495 LCE1DQ5T752 114 aa1.7□□□□□ -2.14
A1CF-207ENST00000395495 LCE1AQ5T7P2 110 aa1.69□□□□□ -2.14
A1CF-207ENST00000395495 LCE5AQ5TCM9 118 aa1.67□□□□□ -2.14
A1CF-207ENST00000395495 MT1XP80297 61 aa1.67□□□□□ -2.14
A1CF-207ENST00000395495 MT1LQ93083 61 aa1.66□□□□□ -2.14
A1CF-207ENST00000395495 KMT2DO14686 5537 aa1.66□□□□□ -2.14
A1CF-207ENST00000395495 KRTAP9-9Q9BYP9 154 aa1.65□□□□□ -2.15
A1CF-207ENST00000395495 TNXBP22105 4242 aa1.65□□□□□ -2.15
A1CF-207ENST00000395495 LOC100996750A0A140TA64 210 aa1.64□□□□□ -2.15
A1CF-207ENST00000395495 MT1BP07438 61 aa1.63□□□□□ -2.15
A1CF-207ENST00000395495 KRTAP4-8A0A0G2JLE6 195 aa1.62□□□□□ -2.15
A1CF-207ENST00000395495 KRTAP4-8Q9BYQ9 185 aa1.62□□□□□ -2.15
A1CF-207ENST00000395495 USH2AO75445 5202 aa1.62□□□□□ -2.15
A1CF-207ENST00000395495 PRM1P04553 51 aa1.61□□□□□ -2.15
A1CF-207ENST00000395495 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
A1CF-207ENST00000395495 LCE1EQ5T753 118 aa1.61□□□□□ -2.15
A1CF-207ENST00000395495 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
A1CF-207ENST00000395495 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
A1CF-207ENST00000395495 KRTAP19-2Q3LHN2 52 aa1.58□□□□□ -2.16
A1CF-207ENST00000395495 MT1EP04732 61 aa1.57□□□□□ -2.16
A1CF-207ENST00000395495 MT1MQ8N339 61 aa1.57□□□□□ -2.16
A1CF-207ENST00000395495 KRTAP4-2Q9BYR5 136 aa1.56□□□□□ -2.16
A1CF-207ENST00000395495 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
A1CF-207ENST00000395495 MT1AP04731 61 aa1.53□□□□□ -2.16
A1CF-207ENST00000395495 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
A1CF-207ENST00000395495 KRTAP5-9P26371 169 aa1.53□□□□□ -2.17
A1CF-207ENST00000395495 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
A1CF-207ENST00000395495 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
A1CF-207ENST00000395495 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
A1CF-207ENST00000395495 KRTAP4-6Q9BYQ5 205 aa1.4□□□□□ -2.18
A1CF-207ENST00000395495 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
A1CF-207ENST00000395495 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
A1CF-207ENST00000395495 KRTAP9-4Q9BYQ2 154 aa1.37□□□□□ -2.19
A1CF-207ENST00000395495 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
A1CF-207ENST00000395495 KRTAP4-3Q9BYR4 195 aa1.36□□□□□ -2.19
A1CF-207ENST00000395495 SYNE1Q8NF91 8797 aaKnown RBP1.36□□□□□ -2.19
A1CF-207ENST00000395495 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
A1CF-207ENST00000395495 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
A1CF-207ENST00000395495 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
A1CF-207ENST00000395495 KRTAP4-11Q9BYQ6 195 aa1.29□□□□□ -2.2
A1CF-207ENST00000395495 KRTAP6-1Q3LI64 71 aa1.29□□□□□ -2.2
A1CF-207ENST00000395495 KRTAP19-7Q3SYF9 63 aa1.29□□□□□ -2.2
A1CF-207ENST00000395495 PHGR1C9JFL3 82 aa1.28□□□□□ -2.21
A1CF-207ENST00000395495 KRTAP4-12Q9BQ66 201 aa1.28□□□□□ -2.21
A1CF-207ENST00000395495 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
A1CF-207ENST00000395495 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
A1CF-207ENST00000395495 KRTAP5-2Q701N4 177 aa1.24□□□□□ -2.21
A1CF-207ENST00000395495 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
A1CF-207ENST00000395495 KRTAP9-6A8MVA2 160 aa1.2□□□□□ -2.22
A1CF-207ENST00000395495 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
A1CF-207ENST00000395495 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
A1CF-207ENST00000395495 KRTAP4-4Q9BYR3 166 aa1.06□□□□□ -2.24
A1CF-207ENST00000395495 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
A1CF-207ENST00000395495 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
A1CF-207ENST00000395495 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.86□□□□□ -2.27
A1CF-207ENST00000395495 KRTAP5-1Q6L8H4 278 aa0.85□□□□□ -2.27
A1CF-207ENST00000395495 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
A1CF-207ENST00000395495 KRTAP5-11Q6L8G4 156 aa0.7□□□□□ -2.3
A1CF-207ENST00000395495 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms