RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
UBE2D3-208ENST00000394803 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
UBE2D3-208ENST00000394803 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
UBE2D3-208ENST00000394803 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
UBE2D3-208ENST00000394803 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
UBE2D3-208ENST00000394803 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
UBE2D3-208ENST00000394803 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
UBE2D3-208ENST00000394803 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
UBE2D3-208ENST00000394803 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
UBE2D3-208ENST00000394803 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
UBE2D3-208ENST00000394803 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
UBE2D3-208ENST00000394803 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
UBE2D3-208ENST00000394803 MT1LQ93083 61 aa3.44□□□□□ -1.86
UBE2D3-208ENST00000394803 MT1EP04732 61 aa3.44□□□□□ -1.86
UBE2D3-208ENST00000394803 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
UBE2D3-208ENST00000394803 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
UBE2D3-208ENST00000394803 KMT2DO14686 5537 aa3.41□□□□□ -1.86
UBE2D3-208ENST00000394803 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
UBE2D3-208ENST00000394803 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
UBE2D3-208ENST00000394803 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
UBE2D3-208ENST00000394803 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
UBE2D3-208ENST00000394803 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
UBE2D3-208ENST00000394803 MT1GP13640 62 aa3.25□□□□□ -1.89
UBE2D3-208ENST00000394803 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
UBE2D3-208ENST00000394803 MT1MQ8N339 61 aa3.21□□□□□ -1.9
UBE2D3-208ENST00000394803 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
UBE2D3-208ENST00000394803 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
UBE2D3-208ENST00000394803 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
UBE2D3-208ENST00000394803 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
UBE2D3-208ENST00000394803 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
UBE2D3-208ENST00000394803 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
UBE2D3-208ENST00000394803 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
UBE2D3-208ENST00000394803 MT1AP04731 61 aa3.03□□□□□ -1.92
UBE2D3-208ENST00000394803 SPRR2EP22531 72 aa2.97□□□□□ -1.93
UBE2D3-208ENST00000394803 SPRR2BP35325 72 aa2.97□□□□□ -1.93
UBE2D3-208ENST00000394803 SPRR2AP35326 72 aa2.97□□□□□ -1.93
UBE2D3-208ENST00000394803 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
UBE2D3-208ENST00000394803 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
UBE2D3-208ENST00000394803 NEBP20929 6669 aa2.92□□□□□ -1.94
UBE2D3-208ENST00000394803 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
UBE2D3-208ENST00000394803 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
UBE2D3-208ENST00000394803 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
UBE2D3-208ENST00000394803 SPRR2DP22532 72 aa2.85□□□□□ -1.95
UBE2D3-208ENST00000394803 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
UBE2D3-208ENST00000394803 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
UBE2D3-208ENST00000394803 PRM1P04553 51 aa2.74□□□□□ -1.97
UBE2D3-208ENST00000394803 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
UBE2D3-208ENST00000394803 MT3P25713 68 aa2.67□□□□□ -1.98
UBE2D3-208ENST00000394803 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
UBE2D3-208ENST00000394803 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
UBE2D3-208ENST00000394803 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
UBE2D3-208ENST00000394803 LCE1FQ5T754 118 aa2.56□□□□□ -2
UBE2D3-208ENST00000394803 MT4P47944 62 aa2.54□□□□□ -2
UBE2D3-208ENST00000394803 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
UBE2D3-208ENST00000394803 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
UBE2D3-208ENST00000394803 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
UBE2D3-208ENST00000394803 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
UBE2D3-208ENST00000394803 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
UBE2D3-208ENST00000394803 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
UBE2D3-208ENST00000394803 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
UBE2D3-208ENST00000394803 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
UBE2D3-208ENST00000394803 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
UBE2D3-208ENST00000394803 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
UBE2D3-208ENST00000394803 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
UBE2D3-208ENST00000394803 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
UBE2D3-208ENST00000394803 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
UBE2D3-208ENST00000394803 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
UBE2D3-208ENST00000394803 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
UBE2D3-208ENST00000394803 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
UBE2D3-208ENST00000394803 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
UBE2D3-208ENST00000394803 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
UBE2D3-208ENST00000394803 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
UBE2D3-208ENST00000394803 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
UBE2D3-208ENST00000394803 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
UBE2D3-208ENST00000394803 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
UBE2D3-208ENST00000394803 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
UBE2D3-208ENST00000394803 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 7.6 ms