RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
MATR3-230ENST00000394800 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
MATR3-230ENST00000394800 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
MATR3-230ENST00000394800 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
MATR3-230ENST00000394800 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
MATR3-230ENST00000394800 LCE4AQ5TA78 99 aa2.01□□□□□ -2.09
MATR3-230ENST00000394800 KRTAP4-7Q9BYR0 210 aa2□□□□□ -2.09
MATR3-230ENST00000394800 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
MATR3-230ENST00000394800 KRTAP9-6A0A140TA67 174 aa1.98□□□□□ -2.09
MATR3-230ENST00000394800 KRTAP9-7A8MTY7 169 aa1.98□□□□□ -2.09
MATR3-230ENST00000394800 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
MATR3-230ENST00000394800 MT1EP04732 61 aa1.96□□□□□ -2.1
MATR3-230ENST00000394800 LCE1AQ5T7P2 110 aa1.96□□□□□ -2.1
MATR3-230ENST00000394800 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
MATR3-230ENST00000394800 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
MATR3-230ENST00000394800 MT1LQ93083 61 aa1.94□□□□□ -2.1
MATR3-230ENST00000394800 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
MATR3-230ENST00000394800 PRM1P04553 51 aa1.91□□□□□ -2.1
MATR3-230ENST00000394800 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
MATR3-230ENST00000394800 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.11
MATR3-230ENST00000394800 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
MATR3-230ENST00000394800 KRTAP9-2Q9BYQ4 174 aa1.88□□□□□ -2.11
MATR3-230ENST00000394800 LOC100996750A0A140TA64 210 aa1.86□□□□□ -2.11
MATR3-230ENST00000394800 LCE1DQ5T752 114 aa1.86□□□□□ -2.11
MATR3-230ENST00000394800 KRTAP2-2Q9BYT5 123 aa1.86□□□□□ -2.11
MATR3-230ENST00000394800 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
MATR3-230ENST00000394800 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.11
MATR3-230ENST00000394800 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.11
MATR3-230ENST00000394800 MT1MQ8N339 61 aa1.84□□□□□ -2.12
MATR3-230ENST00000394800 KRTAP4-6Q9BYQ5 205 aa1.82□□□□□ -2.12
MATR3-230ENST00000394800 MT1GP13640 62 aa1.82□□□□□ -2.12
MATR3-230ENST00000394800 LCE3BQ5TA77 95 aa1.79□□□□□ -2.12
MATR3-230ENST00000394800 KRTAP2-3P0C7H8 128 aa1.79□□□□□ -2.12
MATR3-230ENST00000394800 KRTAP2-4Q9BYR9 128 aa1.79□□□□□ -2.12
MATR3-230ENST00000394800 KRTAP2-1Q9BYU5 128 aa1.79□□□□□ -2.12
MATR3-230ENST00000394800 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
MATR3-230ENST00000394800 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
MATR3-230ENST00000394800 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
MATR3-230ENST00000394800 KRTAP9-9Q9BYP9 154 aa1.68□□□□□ -2.14
MATR3-230ENST00000394800 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.68□□□□□ -2.14
MATR3-230ENST00000394800 SPRR2EP22531 72 aa1.68□□□□□ -2.14
MATR3-230ENST00000394800 SPRR2BP35325 72 aa1.68□□□□□ -2.14
MATR3-230ENST00000394800 SPRR2AP35326 72 aa1.68□□□□□ -2.14
MATR3-230ENST00000394800 KRTAP6-1Q3LI64 71 aa1.67□□□□□ -2.14
MATR3-230ENST00000394800 KRTAP5-5Q701N2 237 aaPredicted RBP1.65□□□□□ -2.15
MATR3-230ENST00000394800 KRTAP4-9Q9BYQ8 210 aa1.64□□□□□ -2.15
MATR3-230ENST00000394800 MT1AP04731 61 aa1.61□□□□□ -2.15
MATR3-230ENST00000394800 SPRR2DP22532 72 aa1.6□□□□□ -2.15
MATR3-230ENST00000394800 NEBP20929 6669 aa1.51□□□□□ -2.17
MATR3-230ENST00000394800 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
MATR3-230ENST00000394800 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
MATR3-230ENST00000394800 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
MATR3-230ENST00000394800 KRTAP4-12Q9BQ66 201 aa1.48□□□□□ -2.17
MATR3-230ENST00000394800 MT4P47944 62 aa1.45□□□□□ -2.18
MATR3-230ENST00000394800 KRTAP4-2Q9BYR5 136 aa1.44□□□□□ -2.18
MATR3-230ENST00000394800 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
MATR3-230ENST00000394800 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
MATR3-230ENST00000394800 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.4□□□□□ -2.18
MATR3-230ENST00000394800 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
MATR3-230ENST00000394800 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
MATR3-230ENST00000394800 KRTAP4-11Q9BYQ6 195 aa1.35□□□□□ -2.19
MATR3-230ENST00000394800 KRTAP5-3Q6L8H2 238 aa1.35□□□□□ -2.19
MATR3-230ENST00000394800 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
MATR3-230ENST00000394800 LCE1BQ5T7P3 118 aa1.32□□□□□ -2.2
MATR3-230ENST00000394800 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
MATR3-230ENST00000394800 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
MATR3-230ENST00000394800 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
MATR3-230ENST00000394800 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
MATR3-230ENST00000394800 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
MATR3-230ENST00000394800 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
MATR3-230ENST00000394800 KRTAP5-8O75690 187 aa1.15□□□□□ -2.23
MATR3-230ENST00000394800 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.24
MATR3-230ENST00000394800 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
MATR3-230ENST00000394800 KRTAP5-11Q6L8G4 156 aa1□□□□□ -2.25
MATR3-230ENST00000394800 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
MATR3-230ENST00000394800 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
MATR3-230ENST00000394800 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms