RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
RAB5C-202ENST00000393860 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
RAB5C-202ENST00000393860 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
RAB5C-202ENST00000393860 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
RAB5C-202ENST00000393860 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
RAB5C-202ENST00000393860 KRTAP19-3Q7Z4W3 81 aa6.8□□□□□ -1.32
RAB5C-202ENST00000393860 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
RAB5C-202ENST00000393860 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
RAB5C-202ENST00000393860 INE1O15225 51 aa6.72□□□□□ -1.33
RAB5C-202ENST00000393860 MT1GP13640 62 aa6.71□□□□□ -1.34
RAB5C-202ENST00000393860 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
RAB5C-202ENST00000393860 MT1MQ8N339 61 aa6.7□□□□□ -1.34
RAB5C-202ENST00000393860 KRTAP4-3Q9BYR4 195 aa6.7□□□□□ -1.34
RAB5C-202ENST00000393860 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
RAB5C-202ENST00000393860 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
RAB5C-202ENST00000393860 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
RAB5C-202ENST00000393860 KRTAP6-3Q3LI67 103 aa6.6□□□□□ -1.35
RAB5C-202ENST00000393860 MDN1Q9NU22 5596 aa6.59□□□□□ -1.35
RAB5C-202ENST00000393860 SPRR2EP22531 72 aa6.58□□□□□ -1.36
RAB5C-202ENST00000393860 SPRR2BP35325 72 aa6.58□□□□□ -1.36
RAB5C-202ENST00000393860 SPRR2AP35326 72 aa6.58□□□□□ -1.36
RAB5C-202ENST00000393860 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
RAB5C-202ENST00000393860 DSTQ03001 7570 aaKnown RBP6.35□□□□□ -1.39
RAB5C-202ENST00000393860 SPRR2DP22532 72 aa6.33□□□□□ -1.4
RAB5C-202ENST00000393860 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
RAB5C-202ENST00000393860 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
RAB5C-202ENST00000393860 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
RAB5C-202ENST00000393860 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
RAB5C-202ENST00000393860 NEBP20929 6669 aa6.16□□□□□ -1.42
RAB5C-202ENST00000393860 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
RAB5C-202ENST00000393860 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
RAB5C-202ENST00000393860 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
RAB5C-202ENST00000393860 KRTAP5-5Q701N2 237 aaPredicted RBP6□□□□□ -1.45
RAB5C-202ENST00000393860 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
RAB5C-202ENST00000393860 MT1AP04731 61 aa5.91□□□□□ -1.46
RAB5C-202ENST00000393860 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
RAB5C-202ENST00000393860 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
RAB5C-202ENST00000393860 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
RAB5C-202ENST00000393860 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.49
RAB5C-202ENST00000393860 KRTAP20-1Q3LI63 56 aa5.67□□□□□ -1.5
RAB5C-202ENST00000393860 KRTAP5-4Q6L8H1 288 aa5.66□□□□□ -1.5
RAB5C-202ENST00000393860 KRTAP2-2Q9BYT5 123 aa5.64□□□□□ -1.51
RAB5C-202ENST00000393860 MT4P47944 62 aa5.55□□□□□ -1.52
RAB5C-202ENST00000393860 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
RAB5C-202ENST00000393860 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
RAB5C-202ENST00000393860 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
RAB5C-202ENST00000393860 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
RAB5C-202ENST00000393860 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
RAB5C-202ENST00000393860 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
RAB5C-202ENST00000393860 MT3P25713 68 aa5.33□□□□□ -1.56
RAB5C-202ENST00000393860 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
RAB5C-202ENST00000393860 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.57
RAB5C-202ENST00000393860 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.58
RAB5C-202ENST00000393860 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
RAB5C-202ENST00000393860 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
RAB5C-202ENST00000393860 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
RAB5C-202ENST00000393860 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
RAB5C-202ENST00000393860 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
RAB5C-202ENST00000393860 PRM1P04553 51 aa4.52□□□□□ -1.69
RAB5C-202ENST00000393860 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
RAB5C-202ENST00000393860 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
RAB5C-202ENST00000393860 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
RAB5C-202ENST00000393860 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
RAB5C-202ENST00000393860 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
RAB5C-202ENST00000393860 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
RAB5C-202ENST00000393860 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
RAB5C-202ENST00000393860 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
RAB5C-202ENST00000393860 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
RAB5C-202ENST00000393860 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
RAB5C-202ENST00000393860 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
RAB5C-202ENST00000393860 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
RAB5C-202ENST00000393860 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
RAB5C-202ENST00000393860 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
RAB5C-202ENST00000393860 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
RAB5C-202ENST00000393860 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
RAB5C-202ENST00000393860 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
RAB5C-202ENST00000393860 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms