RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 MT1LQ93083 61 aa3.97□□□□□ -1.77
R3HDM2-203ENST00000393811 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
R3HDM2-203ENST00000393811 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
R3HDM2-203ENST00000393811 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
R3HDM2-203ENST00000393811 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
R3HDM2-203ENST00000393811 MT1EP04732 61 aa3.93□□□□□ -1.78
R3HDM2-203ENST00000393811 MT1GP13640 62 aa3.9□□□□□ -1.79
R3HDM2-203ENST00000393811 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
R3HDM2-203ENST00000393811 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
R3HDM2-203ENST00000393811 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
R3HDM2-203ENST00000393811 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
R3HDM2-203ENST00000393811 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
R3HDM2-203ENST00000393811 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
R3HDM2-203ENST00000393811 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
R3HDM2-203ENST00000393811 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
R3HDM2-203ENST00000393811 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
R3HDM2-203ENST00000393811 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
R3HDM2-203ENST00000393811 MT1MQ8N339 61 aa3.69□□□□□ -1.82
R3HDM2-203ENST00000393811 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
R3HDM2-203ENST00000393811 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
R3HDM2-203ENST00000393811 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
R3HDM2-203ENST00000393811 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
R3HDM2-203ENST00000393811 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
R3HDM2-203ENST00000393811 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
R3HDM2-203ENST00000393811 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
R3HDM2-203ENST00000393811 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
R3HDM2-203ENST00000393811 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
R3HDM2-203ENST00000393811 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
R3HDM2-203ENST00000393811 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
R3HDM2-203ENST00000393811 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
R3HDM2-203ENST00000393811 PRM1P04553 51 aa3.42□□□□□ -1.86
R3HDM2-203ENST00000393811 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
R3HDM2-203ENST00000393811 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.86
R3HDM2-203ENST00000393811 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
R3HDM2-203ENST00000393811 MT1AP04731 61 aa3.33□□□□□ -1.88
R3HDM2-203ENST00000393811 SPRR2EP22531 72 aa3.33□□□□□ -1.88
R3HDM2-203ENST00000393811 SPRR2BP35325 72 aa3.33□□□□□ -1.88
R3HDM2-203ENST00000393811 SPRR2AP35326 72 aa3.33□□□□□ -1.88
R3HDM2-203ENST00000393811 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
R3HDM2-203ENST00000393811 NEBP20929 6669 aa3.28□□□□□ -1.88
R3HDM2-203ENST00000393811 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
R3HDM2-203ENST00000393811 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
R3HDM2-203ENST00000393811 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
R3HDM2-203ENST00000393811 SPRR2DP22532 72 aa3.2□□□□□ -1.9
R3HDM2-203ENST00000393811 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
R3HDM2-203ENST00000393811 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
R3HDM2-203ENST00000393811 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
R3HDM2-203ENST00000393811 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
R3HDM2-203ENST00000393811 MT3P25713 68 aa3.09□□□□□ -1.91
R3HDM2-203ENST00000393811 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
R3HDM2-203ENST00000393811 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
R3HDM2-203ENST00000393811 MT4P47944 62 aa3.01□□□□□ -1.93
R3HDM2-203ENST00000393811 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
R3HDM2-203ENST00000393811 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
R3HDM2-203ENST00000393811 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
R3HDM2-203ENST00000393811 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
R3HDM2-203ENST00000393811 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
R3HDM2-203ENST00000393811 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
R3HDM2-203ENST00000393811 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
R3HDM2-203ENST00000393811 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
R3HDM2-203ENST00000393811 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
R3HDM2-203ENST00000393811 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
R3HDM2-203ENST00000393811 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
R3HDM2-203ENST00000393811 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
R3HDM2-203ENST00000393811 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
R3HDM2-203ENST00000393811 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
R3HDM2-203ENST00000393811 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
R3HDM2-203ENST00000393811 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
R3HDM2-203ENST00000393811 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
R3HDM2-203ENST00000393811 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
R3HDM2-203ENST00000393811 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
R3HDM2-203ENST00000393811 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
R3HDM2-203ENST00000393811 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
R3HDM2-203ENST00000393811 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
R3HDM2-203ENST00000393811 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
R3HDM2-203ENST00000393811 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
R3HDM2-203ENST00000393811 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
R3HDM2-203ENST00000393811 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms