RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
LAMB1-203ENST00000393560 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
LAMB1-203ENST00000393560 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
LAMB1-203ENST00000393560 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
LAMB1-203ENST00000393560 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
LAMB1-203ENST00000393560 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
LAMB1-203ENST00000393560 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
LAMB1-203ENST00000393560 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
LAMB1-203ENST00000393560 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
LAMB1-203ENST00000393560 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
LAMB1-203ENST00000393560 PRM1P04553 51 aa3.64□□□□□ -1.83
LAMB1-203ENST00000393560 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
LAMB1-203ENST00000393560 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
LAMB1-203ENST00000393560 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
LAMB1-203ENST00000393560 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.84
LAMB1-203ENST00000393560 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.84
LAMB1-203ENST00000393560 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
LAMB1-203ENST00000393560 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
LAMB1-203ENST00000393560 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
LAMB1-203ENST00000393560 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
LAMB1-203ENST00000393560 MT1EP04732 61 aa3.48□□□□□ -1.85
LAMB1-203ENST00000393560 MT1GP13640 62 aa3.45□□□□□ -1.86
LAMB1-203ENST00000393560 MT1LQ93083 61 aa3.44□□□□□ -1.86
LAMB1-203ENST00000393560 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
LAMB1-203ENST00000393560 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
LAMB1-203ENST00000393560 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
LAMB1-203ENST00000393560 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
LAMB1-203ENST00000393560 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
LAMB1-203ENST00000393560 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
LAMB1-203ENST00000393560 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
LAMB1-203ENST00000393560 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
LAMB1-203ENST00000393560 MT1MQ8N339 61 aa3.27□□□□□ -1.89
LAMB1-203ENST00000393560 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
LAMB1-203ENST00000393560 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
LAMB1-203ENST00000393560 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
LAMB1-203ENST00000393560 MT1AP04731 61 aa3.14□□□□□ -1.91
LAMB1-203ENST00000393560 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
LAMB1-203ENST00000393560 SPRR2EP22531 72 aa3.12□□□□□ -1.91
LAMB1-203ENST00000393560 SPRR2BP35325 72 aa3.12□□□□□ -1.91
LAMB1-203ENST00000393560 SPRR2AP35326 72 aa3.12□□□□□ -1.91
LAMB1-203ENST00000393560 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.91
LAMB1-203ENST00000393560 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
LAMB1-203ENST00000393560 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
LAMB1-203ENST00000393560 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.92
LAMB1-203ENST00000393560 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
LAMB1-203ENST00000393560 MT3P25713 68 aa2.99□□□□□ -1.93
LAMB1-203ENST00000393560 SPRR2DP22532 72 aa2.98□□□□□ -1.93
LAMB1-203ENST00000393560 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
LAMB1-203ENST00000393560 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
LAMB1-203ENST00000393560 NEBP20929 6669 aa2.87□□□□□ -1.95
LAMB1-203ENST00000393560 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
LAMB1-203ENST00000393560 MT4P47944 62 aa2.68□□□□□ -1.98
LAMB1-203ENST00000393560 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
LAMB1-203ENST00000393560 HMCN1Q96RW7 5635 aa2.59□□□□□ -2
LAMB1-203ENST00000393560 LCE1CQ5T751 118 aa2.59□□□□□ -2
LAMB1-203ENST00000393560 LCE1BQ5T7P3 118 aa2.59□□□□□ -2
LAMB1-203ENST00000393560 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
LAMB1-203ENST00000393560 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
LAMB1-203ENST00000393560 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
LAMB1-203ENST00000393560 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
LAMB1-203ENST00000393560 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
LAMB1-203ENST00000393560 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
LAMB1-203ENST00000393560 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
LAMB1-203ENST00000393560 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
LAMB1-203ENST00000393560 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
LAMB1-203ENST00000393560 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
LAMB1-203ENST00000393560 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
LAMB1-203ENST00000393560 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
LAMB1-203ENST00000393560 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
LAMB1-203ENST00000393560 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
LAMB1-203ENST00000393560 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
LAMB1-203ENST00000393560 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
LAMB1-203ENST00000393560 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
LAMB1-203ENST00000393560 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
LAMB1-203ENST00000393560 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
LAMB1-203ENST00000393560 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
LAMB1-203ENST00000393560 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms