RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 MT1LQ93083 61 aa3.88□□□□□ -1.79
PDCD4-202ENST00000393104 MT1EP04732 61 aa3.84□□□□□ -1.79
PDCD4-202ENST00000393104 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
PDCD4-202ENST00000393104 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
PDCD4-202ENST00000393104 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
PDCD4-202ENST00000393104 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
PDCD4-202ENST00000393104 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
PDCD4-202ENST00000393104 KRTAP5-9P26371 169 aa3.74□□□□□ -1.81
PDCD4-202ENST00000393104 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
PDCD4-202ENST00000393104 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
PDCD4-202ENST00000393104 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
PDCD4-202ENST00000393104 MT1GP13640 62 aa3.64□□□□□ -1.83
PDCD4-202ENST00000393104 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
PDCD4-202ENST00000393104 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
PDCD4-202ENST00000393104 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
PDCD4-202ENST00000393104 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
PDCD4-202ENST00000393104 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
PDCD4-202ENST00000393104 MT1MQ8N339 61 aa3.57□□□□□ -1.84
PDCD4-202ENST00000393104 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
PDCD4-202ENST00000393104 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
PDCD4-202ENST00000393104 MACF1Q9UPN3 7388 aaKnown RBP3.53□□□□□ -1.84
PDCD4-202ENST00000393104 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
PDCD4-202ENST00000393104 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
PDCD4-202ENST00000393104 SPRR2EP22531 72 aa3.43□□□□□ -1.86
PDCD4-202ENST00000393104 SPRR2BP35325 72 aa3.43□□□□□ -1.86
PDCD4-202ENST00000393104 SPRR2AP35326 72 aa3.43□□□□□ -1.86
PDCD4-202ENST00000393104 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
PDCD4-202ENST00000393104 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
PDCD4-202ENST00000393104 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
PDCD4-202ENST00000393104 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
PDCD4-202ENST00000393104 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.88
PDCD4-202ENST00000393104 MT1AP04731 61 aa3.33□□□□□ -1.88
PDCD4-202ENST00000393104 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
PDCD4-202ENST00000393104 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
PDCD4-202ENST00000393104 SPRR2DP22532 72 aa3.32□□□□□ -1.88
PDCD4-202ENST00000393104 NEBP20929 6669 aa3.28□□□□□ -1.88
PDCD4-202ENST00000393104 PRM1P04553 51 aa3.18□□□□□ -1.9
PDCD4-202ENST00000393104 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
PDCD4-202ENST00000393104 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
PDCD4-202ENST00000393104 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
PDCD4-202ENST00000393104 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
PDCD4-202ENST00000393104 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
PDCD4-202ENST00000393104 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
PDCD4-202ENST00000393104 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
PDCD4-202ENST00000393104 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.93
PDCD4-202ENST00000393104 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
PDCD4-202ENST00000393104 MT3P25713 68 aa2.87□□□□□ -1.95
PDCD4-202ENST00000393104 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
PDCD4-202ENST00000393104 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
PDCD4-202ENST00000393104 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
PDCD4-202ENST00000393104 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
PDCD4-202ENST00000393104 MT4P47944 62 aa2.77□□□□□ -1.97
PDCD4-202ENST00000393104 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
PDCD4-202ENST00000393104 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
PDCD4-202ENST00000393104 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
PDCD4-202ENST00000393104 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
PDCD4-202ENST00000393104 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
PDCD4-202ENST00000393104 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
PDCD4-202ENST00000393104 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
PDCD4-202ENST00000393104 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
PDCD4-202ENST00000393104 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
PDCD4-202ENST00000393104 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
PDCD4-202ENST00000393104 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
PDCD4-202ENST00000393104 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
PDCD4-202ENST00000393104 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PDCD4-202ENST00000393104 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PDCD4-202ENST00000393104 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
PDCD4-202ENST00000393104 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
PDCD4-202ENST00000393104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
PDCD4-202ENST00000393104 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
PDCD4-202ENST00000393104 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
PDCD4-202ENST00000393104 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
PDCD4-202ENST00000393104 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
PDCD4-202ENST00000393104 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
PDCD4-202ENST00000393104 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
PDCD4-202ENST00000393104 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
PDCD4-202ENST00000393104 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 81.1 ms