RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 UQCR11O14957 56 aa4.87□□□□□ -1.63
CCDC57-204ENST00000392345 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
CCDC57-204ENST00000392345 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
CCDC57-204ENST00000392345 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
CCDC57-204ENST00000392345 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
CCDC57-204ENST00000392345 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
CCDC57-204ENST00000392345 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
CCDC57-204ENST00000392345 PSPHP1O15172 72 aa4.74□□□□□ -1.65
CCDC57-204ENST00000392345 MT4P47944 62 aa4.74□□□□□ -1.65
CCDC57-204ENST00000392345 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
CCDC57-204ENST00000392345 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
CCDC57-204ENST00000392345 Q1T7F1 81 aa4.68□□□□□ -1.66
CCDC57-204ENST00000392345 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
CCDC57-204ENST00000392345 V9GYY9 64 aa4.66□□□□□ -1.66
CCDC57-204ENST00000392345 K7ERS5 55 aa4.63□□□□□ -1.67
CCDC57-204ENST00000392345 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
CCDC57-204ENST00000392345 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
CCDC57-204ENST00000392345 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
CCDC57-204ENST00000392345 A6NED7 52 aa4.54□□□□□ -1.68
CCDC57-204ENST00000392345 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
CCDC57-204ENST00000392345 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
CCDC57-204ENST00000392345 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
CCDC57-204ENST00000392345 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
CCDC57-204ENST00000392345 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
CCDC57-204ENST00000392345 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
CCDC57-204ENST00000392345 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
CCDC57-204ENST00000392345 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
CCDC57-204ENST00000392345 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
CCDC57-204ENST00000392345 ROMO1P60602 79 aa4.38□□□□□ -1.71
CCDC57-204ENST00000392345 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
CCDC57-204ENST00000392345 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
CCDC57-204ENST00000392345 PCP4P48539 62 aa4.36□□□□□ -1.71
CCDC57-204ENST00000392345 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
CCDC57-204ENST00000392345 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
CCDC57-204ENST00000392345 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
CCDC57-204ENST00000392345 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
CCDC57-204ENST00000392345 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
CCDC57-204ENST00000392345 MT1AP04731 61 aa4.21□□□□□ -1.74
CCDC57-204ENST00000392345 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
CCDC57-204ENST00000392345 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
CCDC57-204ENST00000392345 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
CCDC57-204ENST00000392345 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
CCDC57-204ENST00000392345 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
CCDC57-204ENST00000392345 BRK1Q8WUW1 75 aa3.9□□□□□ -1.79
CCDC57-204ENST00000392345 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CCDC57-204ENST00000392345 MT3P25713 68 aa3.82□□□□□ -1.8
CCDC57-204ENST00000392345 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
CCDC57-204ENST00000392345 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
CCDC57-204ENST00000392345 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
CCDC57-204ENST00000392345 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
CCDC57-204ENST00000392345 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
CCDC57-204ENST00000392345 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
CCDC57-204ENST00000392345 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
CCDC57-204ENST00000392345 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
CCDC57-204ENST00000392345 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
CCDC57-204ENST00000392345 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
CCDC57-204ENST00000392345 PRO0628Q9UI54 55 aa3.32□□□□□ -1.88
CCDC57-204ENST00000392345 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
CCDC57-204ENST00000392345 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
CCDC57-204ENST00000392345 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
CCDC57-204ENST00000392345 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
CCDC57-204ENST00000392345 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CCDC57-204ENST00000392345 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
CCDC57-204ENST00000392345 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CCDC57-204ENST00000392345 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CCDC57-204ENST00000392345 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
CCDC57-204ENST00000392345 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
CCDC57-204ENST00000392345 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
CCDC57-204ENST00000392345 PHGR1C9JFL3 82 aa2.57□□□□□ -2
CCDC57-204ENST00000392345 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CCDC57-204ENST00000392345 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
CCDC57-204ENST00000392345 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
CCDC57-204ENST00000392345 PRM1P04553 51 aa2.28□□□□□ -2.04
CCDC57-204ENST00000392345 H3BS24 57 aa2.04□□□□□ -2.08
CCDC57-204ENST00000392345 A0A0A0MQY5 61 aa2□□□□□ -2.09
CCDC57-204ENST00000392345 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
CCDC57-204ENST00000392345 INE1O15225 51 aa1.87□□□□□ -2.11
CCDC57-204ENST00000392345 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms